Hb_004529_020

Information

Type -
Description -
Location Contig4529: 23375-23824
Sequence    

Annotation

kegg
ID cic:CICLE_v10013017mg
description hypothetical protein
nr
ID XP_012066508.1
description PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L2Z2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23702 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43242: 23215-23517
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004529_020 0.0 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
2 Hb_092043_020 0.0721354982 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
3 Hb_023528_010 0.0806040021 - - hypothetical protein POPTR_0013s01580g [Populus trichocarpa]
4 Hb_001104_040 0.1677736695 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
5 Hb_003793_050 0.1739968415 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
6 Hb_125948_020 0.189327118 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
7 Hb_007943_010 0.205032482 - - -
8 Hb_116436_010 0.2162375579 - - PREDICTED: uncharacterized protein LOC105766967 [Gossypium raimondii]
9 Hb_000891_080 0.2344281506 - - PREDICTED: TMV resistance protein N-like, partial [Populus euphratica]
10 Hb_010555_020 0.2571238652 - - hypothetical protein JCGZ_06771 [Jatropha curcas]
11 Hb_003392_010 0.2585959502 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
12 Hb_002890_190 0.2604024288 - - PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
13 Hb_049827_010 0.260804186 - - PREDICTED: uncharacterized protein LOC105762110 [Gossypium raimondii]
14 Hb_001279_230 0.2632772274 - - PREDICTED: class I heat shock protein-like [Jatropha curcas]
15 Hb_006387_010 0.2634160646 - - PREDICTED: uncharacterized protein LOC105649124 [Jatropha curcas]
16 Hb_007382_020 0.2650266187 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
17 Hb_005730_100 0.2657508736 - - PREDICTED: 18.2 kDa class I heat shock protein-like [Gossypium raimondii]
18 Hb_001863_210 0.2696715925 - - -
19 Hb_185830_100 0.2707876608 - - -
20 Hb_001269_560 0.2709693507 - - heat-shock protein 70 [Hevea brasiliensis]

Gene co-expression network

sample Hb_004529_020 Hb_004529_020 Hb_092043_020 Hb_092043_020 Hb_004529_020--Hb_092043_020 Hb_023528_010 Hb_023528_010 Hb_004529_020--Hb_023528_010 Hb_001104_040 Hb_001104_040 Hb_004529_020--Hb_001104_040 Hb_003793_050 Hb_003793_050 Hb_004529_020--Hb_003793_050 Hb_125948_020 Hb_125948_020 Hb_004529_020--Hb_125948_020 Hb_007943_010 Hb_007943_010 Hb_004529_020--Hb_007943_010 Hb_092043_020--Hb_023528_010 Hb_092043_020--Hb_003793_050 Hb_116436_010 Hb_116436_010 Hb_092043_020--Hb_116436_010 Hb_092043_020--Hb_001104_040 Hb_010555_020 Hb_010555_020 Hb_092043_020--Hb_010555_020 Hb_023528_010--Hb_003793_050 Hb_023528_010--Hb_007943_010 Hb_023528_010--Hb_125948_020 Hb_023528_010--Hb_001104_040 Hb_001279_230 Hb_001279_230 Hb_001104_040--Hb_001279_230 Hb_001104_040--Hb_116436_010 Hb_003647_120 Hb_003647_120 Hb_001104_040--Hb_003647_120 Hb_048207_010 Hb_048207_010 Hb_001104_040--Hb_048207_010 Hb_003793_050--Hb_007943_010 Hb_003392_010 Hb_003392_010 Hb_003793_050--Hb_003392_010 Hb_049827_010 Hb_049827_010 Hb_003793_050--Hb_049827_010 Hb_125948_020--Hb_007943_010 Hb_125948_020--Hb_003392_010 Hb_125948_020--Hb_049827_010 Hb_004846_170 Hb_004846_170 Hb_125948_020--Hb_004846_170 Hb_007943_010--Hb_003392_010 Hb_007943_010--Hb_049827_010 Hb_006387_010 Hb_006387_010 Hb_007943_010--Hb_006387_010 Hb_001863_210 Hb_001863_210 Hb_007943_010--Hb_001863_210 Hb_185830_100 Hb_185830_100 Hb_007943_010--Hb_185830_100 Hb_002708_010 Hb_002708_010 Hb_007943_010--Hb_002708_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
67.4984 430.045 0.162505 0.440404 1388.08 34.1594
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 10.636 1.53769 0

CAGE analysis