Hb_092043_020

Information

Type -
Description -
Location Contig92043: 1039-1488
Sequence    

Annotation

kegg
ID egr:104456016
description uncharacterized LOC104456016
nr
ID XP_012066508.1
description PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L2Z2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23702 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_092043_020 0.0 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
2 Hb_004529_020 0.0721354982 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
3 Hb_023528_010 0.1113808591 - - hypothetical protein POPTR_0013s01580g [Populus trichocarpa]
4 Hb_003793_050 0.1686072388 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
5 Hb_116436_010 0.1845740168 - - PREDICTED: uncharacterized protein LOC105766967 [Gossypium raimondii]
6 Hb_001104_040 0.195888542 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
7 Hb_010555_020 0.2215573309 - - hypothetical protein JCGZ_06771 [Jatropha curcas]
8 Hb_000891_080 0.2245304486 - - PREDICTED: TMV resistance protein N-like, partial [Populus euphratica]
9 Hb_000107_130 0.2248370498 - - multicopper oxidase, putative [Ricinus communis]
10 Hb_000060_110 0.2256988616 - - PREDICTED: uncharacterized protein LOC105649714 [Jatropha curcas]
11 Hb_007943_010 0.2300529819 - - -
12 Hb_125948_020 0.2304603771 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
13 Hb_002890_190 0.2403144175 - - PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
14 Hb_007127_010 0.2528362379 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
15 Hb_007382_020 0.2664154383 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
16 Hb_005730_100 0.2681140137 - - PREDICTED: 18.2 kDa class I heat shock protein-like [Gossypium raimondii]
17 Hb_022693_150 0.2689782872 - - -
18 Hb_003392_010 0.2959105328 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
19 Hb_049827_010 0.2984224878 - - PREDICTED: uncharacterized protein LOC105762110 [Gossypium raimondii]
20 Hb_048207_010 0.2987488394 - - heat-shock protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_092043_020 Hb_092043_020 Hb_004529_020 Hb_004529_020 Hb_092043_020--Hb_004529_020 Hb_023528_010 Hb_023528_010 Hb_092043_020--Hb_023528_010 Hb_003793_050 Hb_003793_050 Hb_092043_020--Hb_003793_050 Hb_116436_010 Hb_116436_010 Hb_092043_020--Hb_116436_010 Hb_001104_040 Hb_001104_040 Hb_092043_020--Hb_001104_040 Hb_010555_020 Hb_010555_020 Hb_092043_020--Hb_010555_020 Hb_004529_020--Hb_023528_010 Hb_004529_020--Hb_001104_040 Hb_004529_020--Hb_003793_050 Hb_125948_020 Hb_125948_020 Hb_004529_020--Hb_125948_020 Hb_007943_010 Hb_007943_010 Hb_004529_020--Hb_007943_010 Hb_023528_010--Hb_003793_050 Hb_023528_010--Hb_007943_010 Hb_023528_010--Hb_125948_020 Hb_023528_010--Hb_001104_040 Hb_003793_050--Hb_007943_010 Hb_003392_010 Hb_003392_010 Hb_003793_050--Hb_003392_010 Hb_049827_010 Hb_049827_010 Hb_003793_050--Hb_049827_010 Hb_007127_010 Hb_007127_010 Hb_116436_010--Hb_007127_010 Hb_000107_130 Hb_000107_130 Hb_116436_010--Hb_000107_130 Hb_002890_190 Hb_002890_190 Hb_116436_010--Hb_002890_190 Hb_116436_010--Hb_001104_040 Hb_002900_060 Hb_002900_060 Hb_116436_010--Hb_002900_060 Hb_001279_230 Hb_001279_230 Hb_001104_040--Hb_001279_230 Hb_003647_120 Hb_003647_120 Hb_001104_040--Hb_003647_120 Hb_048207_010 Hb_048207_010 Hb_001104_040--Hb_048207_010 Hb_000060_110 Hb_000060_110 Hb_010555_020--Hb_000060_110 Hb_010555_020--Hb_003793_050 Hb_010555_020--Hb_000107_130 Hb_010555_020--Hb_023528_010 Hb_010555_020--Hb_004529_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
44.3047 238.146 0.166286 0.73329 1105.98 11.4393
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 9.5933 0.689309 0

CAGE analysis