Hb_007943_010

Information

Type -
Description -
Location Contig7943: 9527-15578
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007943_010 0.0 - - -
2 Hb_003392_010 0.0849542709 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
3 Hb_049827_010 0.0880150732 - - PREDICTED: uncharacterized protein LOC105762110 [Gossypium raimondii]
4 Hb_006387_010 0.0916094921 - - PREDICTED: uncharacterized protein LOC105649124 [Jatropha curcas]
5 Hb_001863_210 0.1001125092 - - -
6 Hb_185830_100 0.1016148859 - - -
7 Hb_002708_010 0.1032797417 - - -
8 Hb_003793_050 0.1062262304 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
9 Hb_102355_010 0.1240907138 - - PREDICTED: uncharacterized protein LOC104094591, partial [Nicotiana tomentosiformis]
10 Hb_086484_010 0.1282457088 - - PREDICTED: uncharacterized protein LOC101259761 [Solanum lycopersicum]
11 Hb_003637_030 0.1486567119 - - -
12 Hb_023528_010 0.1559737971 - - hypothetical protein POPTR_0013s01580g [Populus trichocarpa]
13 Hb_125948_020 0.1773424858 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
14 Hb_038190_040 0.1955886519 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
15 Hb_004529_020 0.205032482 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
16 Hb_092043_020 0.2300529819 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
17 Hb_012264_040 0.2343935654 - - -
18 Hb_135941_010 0.2459059318 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
19 Hb_133862_010 0.249194978 - - hypothetical protein POPTR_0009s13360g [Populus trichocarpa]
20 Hb_001066_020 0.2646662306 - - PREDICTED: uncharacterized protein LOC104908874, partial [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_007943_010 Hb_007943_010 Hb_003392_010 Hb_003392_010 Hb_007943_010--Hb_003392_010 Hb_049827_010 Hb_049827_010 Hb_007943_010--Hb_049827_010 Hb_006387_010 Hb_006387_010 Hb_007943_010--Hb_006387_010 Hb_001863_210 Hb_001863_210 Hb_007943_010--Hb_001863_210 Hb_185830_100 Hb_185830_100 Hb_007943_010--Hb_185830_100 Hb_002708_010 Hb_002708_010 Hb_007943_010--Hb_002708_010 Hb_003392_010--Hb_049827_010 Hb_003392_010--Hb_006387_010 Hb_003392_010--Hb_001863_210 Hb_003392_010--Hb_185830_100 Hb_003392_010--Hb_002708_010 Hb_102355_010 Hb_102355_010 Hb_003392_010--Hb_102355_010 Hb_049827_010--Hb_006387_010 Hb_049827_010--Hb_001863_210 Hb_049827_010--Hb_185830_100 Hb_049827_010--Hb_002708_010 Hb_049827_010--Hb_102355_010 Hb_006387_010--Hb_001863_210 Hb_006387_010--Hb_185830_100 Hb_006387_010--Hb_002708_010 Hb_006387_010--Hb_102355_010 Hb_001863_210--Hb_185830_100 Hb_001863_210--Hb_002708_010 Hb_001863_210--Hb_102355_010 Hb_185830_100--Hb_002708_010 Hb_185830_100--Hb_102355_010 Hb_002708_010--Hb_102355_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.056408 0 0 0.1026 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis