Hb_009421_050

Information

Type -
Description -
Location Contig9421: 59656-64810
Sequence    

Annotation

kegg
ID pmum:103338992
description uncharacterized LOC103338992
nr
ID XP_012088409.1
description PREDICTED: uncharacterized protein LOC105647037 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JJJ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25724 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63209: 60240-60518
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009421_050 0.0 - - PREDICTED: uncharacterized protein LOC105647037 [Jatropha curcas]
2 Hb_178658_010 0.1383129788 - - PREDICTED: uncharacterized protein LOC105641396 [Jatropha curcas]
3 Hb_000003_760 0.1533353811 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA26-like [Jatropha curcas]
4 Hb_009557_050 0.1707107178 transcription factor TF Family: C2H2 zinc finger family protein [Populus trichocarpa]
5 Hb_001541_160 0.1736897769 - - PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Jatropha curcas]
6 Hb_001956_190 0.1738352604 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
7 Hb_000336_190 0.1755370724 - - PREDICTED: UPF0481 protein At3g47200-like [Gossypium raimondii]
8 Hb_001791_010 0.1819632387 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g63710 [Jatropha curcas]
9 Hb_111881_030 0.1835816644 - - PREDICTED: uncharacterized protein LOC105645255 [Jatropha curcas]
10 Hb_002234_130 0.1870637479 - - ATPP2-A13, putative [Ricinus communis]
11 Hb_000836_210 0.1889396074 - - hypothetical protein JCGZ_14362 [Jatropha curcas]
12 Hb_000087_100 0.1894694093 - - PREDICTED: cellulose synthase-like protein D3 [Jatropha curcas]
13 Hb_012787_040 0.1945857356 - - PREDICTED: uncharacterized protein LOC105649794 isoform X2 [Jatropha curcas]
14 Hb_000172_080 0.1955139842 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Jatropha curcas]
15 Hb_003531_040 0.1960492158 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
16 Hb_000975_370 0.1965154277 transcription factor TF Family: MYB PREDICTED: transcription factor MYB59 isoform X1 [Jatropha curcas]
17 Hb_000506_130 0.196840293 - - DGCR14-related family protein [Populus trichocarpa]
18 Hb_001511_190 0.1971409206 - - PREDICTED: probable protein phosphatase 2C 25 [Jatropha curcas]
19 Hb_002311_110 0.2007158096 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000523_120 0.20077104 - - PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Jatropha curcas]

Gene co-expression network

sample Hb_009421_050 Hb_009421_050 Hb_178658_010 Hb_178658_010 Hb_009421_050--Hb_178658_010 Hb_000003_760 Hb_000003_760 Hb_009421_050--Hb_000003_760 Hb_009557_050 Hb_009557_050 Hb_009421_050--Hb_009557_050 Hb_001541_160 Hb_001541_160 Hb_009421_050--Hb_001541_160 Hb_001956_190 Hb_001956_190 Hb_009421_050--Hb_001956_190 Hb_000336_190 Hb_000336_190 Hb_009421_050--Hb_000336_190 Hb_002311_110 Hb_002311_110 Hb_178658_010--Hb_002311_110 Hb_178658_010--Hb_000336_190 Hb_000836_210 Hb_000836_210 Hb_178658_010--Hb_000836_210 Hb_002849_110 Hb_002849_110 Hb_178658_010--Hb_002849_110 Hb_007382_100 Hb_007382_100 Hb_178658_010--Hb_007382_100 Hb_000087_100 Hb_000087_100 Hb_178658_010--Hb_000087_100 Hb_001787_070 Hb_001787_070 Hb_000003_760--Hb_001787_070 Hb_000003_760--Hb_000336_190 Hb_111881_030 Hb_111881_030 Hb_000003_760--Hb_111881_030 Hb_000003_760--Hb_009557_050 Hb_000003_760--Hb_001956_190 Hb_000003_760--Hb_178658_010 Hb_008406_030 Hb_008406_030 Hb_009557_050--Hb_008406_030 Hb_004241_200 Hb_004241_200 Hb_009557_050--Hb_004241_200 Hb_001472_140 Hb_001472_140 Hb_009557_050--Hb_001472_140 Hb_002234_130 Hb_002234_130 Hb_009557_050--Hb_002234_130 Hb_019026_030 Hb_019026_030 Hb_009557_050--Hb_019026_030 Hb_002004_010 Hb_002004_010 Hb_001541_160--Hb_002004_010 Hb_001541_160--Hb_000836_210 Hb_001541_160--Hb_002849_110 Hb_000975_370 Hb_000975_370 Hb_001541_160--Hb_000975_370 Hb_004013_020 Hb_004013_020 Hb_001541_160--Hb_004013_020 Hb_050847_030 Hb_050847_030 Hb_001541_160--Hb_050847_030 Hb_001956_190--Hb_111881_030 Hb_000003_430 Hb_000003_430 Hb_001956_190--Hb_000003_430 Hb_000506_130 Hb_000506_130 Hb_001956_190--Hb_000506_130 Hb_000270_770 Hb_000270_770 Hb_001956_190--Hb_000270_770 Hb_001956_190--Hb_000336_190 Hb_000336_190--Hb_000836_210 Hb_002875_070 Hb_002875_070 Hb_000336_190--Hb_002875_070 Hb_000336_190--Hb_002849_110 Hb_000336_190--Hb_001472_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.239388 3.18692 0.493983 1.68605 0 0.293294
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.357736 0.211038 0.065146 0.239909 0.507125

CAGE analysis