Hb_008406_080

Information

Type -
Description -
Location Contig8406: 65055-65405
Sequence    

Annotation

kegg
ID rcu:RCOM_1173320
description Nonspecific lipid-transfer protein 3 precursor, putative
nr
ID XP_002517877.1
description Nonspecific lipid-transfer protein 3 precursor, putative [Ricinus communis]
swissprot
ID P55958
description Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1
trembl
ID B9RVV8
description Non-specific lipid-transfer protein OS=Ricinus communis GN=RCOM_1173320 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008406_080 0.0 - - Nonspecific lipid-transfer protein 3 precursor, putative [Ricinus communis]
2 Hb_007894_020 0.1533312187 - - protein translation factor SUI1 homolog 2 [Jatropha curcas]
3 Hb_101058_020 0.1703443818 - - DWNN domain isoform 2 [Theobroma cacao]
4 Hb_002982_030 0.1727873343 - - Chalcone synthase, putative [Ricinus communis]
5 Hb_173271_010 0.1928315292 - - Disease resistance protein RPP13, putative [Ricinus communis]
6 Hb_001268_060 0.1971332858 - - conserved hypothetical protein [Ricinus communis]
7 Hb_022137_020 0.2004508833 transcription factor TF Family: AP2 PREDICTED: dehydration-responsive element-binding protein 1B-like [Jatropha curcas]
8 Hb_186589_010 0.2047191038 - - PREDICTED: developmentally-regulated G-protein 3 [Nelumbo nucifera]
9 Hb_000260_300 0.2059724219 - - calcium binding protein/cast, putative [Ricinus communis]
10 Hb_008637_020 0.2060105348 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004079_040 0.210602164 - - hypothetical protein JCGZ_07227 [Jatropha curcas]
12 Hb_155946_030 0.2108812138 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
13 Hb_109591_010 0.2112337685 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
14 Hb_055277_010 0.2137372637 - - PREDICTED: coenzyme Q-binding protein COQ10 homolog, mitochondrial [Jatropha curcas]
15 Hb_002133_010 0.2142204564 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
16 Hb_002542_030 0.2159657954 transcription factor TF Family: Tify JAZ7 [Hevea brasiliensis]
17 Hb_187620_010 0.217416816 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
18 Hb_158926_010 0.2174282037 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
19 Hb_128083_010 0.220466387 transcription factor TF Family: C2C2-Dof zinc finger protein, putative [Ricinus communis]
20 Hb_124677_020 0.2235631065 - - hypothetical protein CARUB_v10021660mg, partial [Capsella rubella]

Gene co-expression network

sample Hb_008406_080 Hb_008406_080 Hb_007894_020 Hb_007894_020 Hb_008406_080--Hb_007894_020 Hb_101058_020 Hb_101058_020 Hb_008406_080--Hb_101058_020 Hb_002982_030 Hb_002982_030 Hb_008406_080--Hb_002982_030 Hb_173271_010 Hb_173271_010 Hb_008406_080--Hb_173271_010 Hb_001268_060 Hb_001268_060 Hb_008406_080--Hb_001268_060 Hb_022137_020 Hb_022137_020 Hb_008406_080--Hb_022137_020 Hb_007894_020--Hb_101058_020 Hb_007894_020--Hb_022137_020 Hb_158926_010 Hb_158926_010 Hb_007894_020--Hb_158926_010 Hb_002542_030 Hb_002542_030 Hb_007894_020--Hb_002542_030 Hb_155946_030 Hb_155946_030 Hb_007894_020--Hb_155946_030 Hb_124677_020 Hb_124677_020 Hb_007894_020--Hb_124677_020 Hb_101058_020--Hb_158926_010 Hb_101058_020--Hb_022137_020 Hb_000665_090 Hb_000665_090 Hb_101058_020--Hb_000665_090 Hb_001894_060 Hb_001894_060 Hb_101058_020--Hb_001894_060 Hb_004079_040 Hb_004079_040 Hb_101058_020--Hb_004079_040 Hb_002982_030--Hb_007894_020 Hb_002982_030--Hb_022137_020 Hb_002982_030--Hb_101058_020 Hb_009692_030 Hb_009692_030 Hb_002982_030--Hb_009692_030 Hb_002007_070 Hb_002007_070 Hb_002982_030--Hb_002007_070 Hb_001775_090 Hb_001775_090 Hb_173271_010--Hb_001775_090 Hb_000162_130 Hb_000162_130 Hb_173271_010--Hb_000162_130 Hb_005048_120 Hb_005048_120 Hb_173271_010--Hb_005048_120 Hb_001459_040 Hb_001459_040 Hb_173271_010--Hb_001459_040 Hb_002133_010 Hb_002133_010 Hb_173271_010--Hb_002133_010 Hb_064885_010 Hb_064885_010 Hb_173271_010--Hb_064885_010 Hb_000836_160 Hb_000836_160 Hb_001268_060--Hb_000836_160 Hb_082225_010 Hb_082225_010 Hb_001268_060--Hb_082225_010 Hb_006043_020 Hb_006043_020 Hb_001268_060--Hb_006043_020 Hb_078171_010 Hb_078171_010 Hb_001268_060--Hb_078171_010 Hb_000086_610 Hb_000086_610 Hb_001268_060--Hb_000086_610 Hb_031530_010 Hb_031530_010 Hb_001268_060--Hb_031530_010 Hb_022137_020--Hb_158926_010 Hb_022137_020--Hb_002542_030 Hb_022137_020--Hb_124677_020 Hb_001999_170 Hb_001999_170 Hb_022137_020--Hb_001999_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.54288 2.39124 1.4736 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.259812 0.408367 0 0 0

CAGE analysis