Hb_007380_010

Information

Type -
Description -
Location Contig7380: 5819-11255
Sequence    

Annotation

kegg
ID cit:102626220
description putative receptor-like protein kinase At3g47110-like
nr
ID KCW45939.1
description hypothetical protein EUGRSUZ_L00213, partial [Eucalyptus grandis]
swissprot
ID Q3EDL4
description Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2
trembl
ID K7LFA4
description Uncharacterized protein OS=Glycine max PE=4 SV=1
Gene Ontology
ID GO:0016772
description kinase-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007380_010 0.0 - - hypothetical protein EUGRSUZ_L00213, partial [Eucalyptus grandis]
2 Hb_181909_010 0.2465027359 - - PREDICTED: uncharacterized protein LOC105786773 [Gossypium raimondii]
3 Hb_000190_100 0.2500063003 transcription factor TF Family: C2H2 hypothetical protein POPTR_0002s04880g [Populus trichocarpa]
4 Hb_132915_010 0.2707137276 - - PREDICTED: uncharacterized protein LOC103700431, partial [Phoenix dactylifera]
5 Hb_062585_010 0.3137828043 - - hypothetical protein JCGZ_19532 [Jatropha curcas]
6 Hb_007537_010 0.3144736848 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
7 Hb_000567_080 0.3152582246 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Jatropha curcas]
8 Hb_015970_010 0.3205483305 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
9 Hb_005699_080 0.3293667884 - - PREDICTED: ABC transporter G family member 10-like [Jatropha curcas]
10 Hb_133748_010 0.3330129127 - - -
11 Hb_008225_070 0.3419335235 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
12 Hb_000175_500 0.3466306399 - - PREDICTED: uncharacterized protein At1g15400 [Populus euphratica]
13 Hb_005702_030 0.3477863677 - - PREDICTED: TMV resistance protein N-like isoform X2 [Vitis vinifera]
14 Hb_012753_080 0.3483435914 - - -
15 Hb_007379_020 0.3516577186 - - hypothetical protein JCGZ_25958 [Jatropha curcas]
16 Hb_002863_100 0.3555183321 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
17 Hb_005539_170 0.3569231898 - - PREDICTED: uncharacterized protein LOC101502180 [Cicer arietinum]
18 Hb_012573_080 0.3579077945 - - hypothetical protein JCGZ_13311 [Jatropha curcas]
19 Hb_005147_050 0.3581383599 - - PREDICTED: ankyrin-2-like [Citrus sinensis]
20 Hb_004032_420 0.3633411472 - - PREDICTED: AT-hook motif nuclear-localized protein 25-like [Jatropha curcas]

Gene co-expression network

sample Hb_007380_010 Hb_007380_010 Hb_181909_010 Hb_181909_010 Hb_007380_010--Hb_181909_010 Hb_000190_100 Hb_000190_100 Hb_007380_010--Hb_000190_100 Hb_132915_010 Hb_132915_010 Hb_007380_010--Hb_132915_010 Hb_062585_010 Hb_062585_010 Hb_007380_010--Hb_062585_010 Hb_007537_010 Hb_007537_010 Hb_007380_010--Hb_007537_010 Hb_000567_080 Hb_000567_080 Hb_007380_010--Hb_000567_080 Hb_181909_010--Hb_132915_010 Hb_008511_010 Hb_008511_010 Hb_181909_010--Hb_008511_010 Hb_181909_010--Hb_000190_100 Hb_000192_110 Hb_000192_110 Hb_181909_010--Hb_000192_110 Hb_181909_010--Hb_007537_010 Hb_000152_020 Hb_000152_020 Hb_000190_100--Hb_000152_020 Hb_017434_060 Hb_017434_060 Hb_000190_100--Hb_017434_060 Hb_005841_080 Hb_005841_080 Hb_000190_100--Hb_005841_080 Hb_000215_410 Hb_000215_410 Hb_000190_100--Hb_000215_410 Hb_000140_410 Hb_000140_410 Hb_000190_100--Hb_000140_410 Hb_132915_010--Hb_062585_010 Hb_000252_030 Hb_000252_030 Hb_132915_010--Hb_000252_030 Hb_000347_500 Hb_000347_500 Hb_132915_010--Hb_000347_500 Hb_130788_010 Hb_130788_010 Hb_132915_010--Hb_130788_010 Hb_001396_170 Hb_001396_170 Hb_062585_010--Hb_001396_170 Hb_000003_390 Hb_000003_390 Hb_062585_010--Hb_000003_390 Hb_000574_150 Hb_000574_150 Hb_062585_010--Hb_000574_150 Hb_002804_050 Hb_002804_050 Hb_062585_010--Hb_002804_050 Hb_005504_010 Hb_005504_010 Hb_062585_010--Hb_005504_010 Hb_002735_040 Hb_002735_040 Hb_062585_010--Hb_002735_040 Hb_108886_010 Hb_108886_010 Hb_007537_010--Hb_108886_010 Hb_001338_060 Hb_001338_060 Hb_007537_010--Hb_001338_060 Hb_005045_040 Hb_005045_040 Hb_007537_010--Hb_005045_040 Hb_007537_010--Hb_000567_080 Hb_001976_080 Hb_001976_080 Hb_007537_010--Hb_001976_080 Hb_000567_080--Hb_000215_410 Hb_129204_060 Hb_129204_060 Hb_000567_080--Hb_129204_060 Hb_004032_420 Hb_004032_420 Hb_000567_080--Hb_004032_420 Hb_002235_240 Hb_002235_240 Hb_000567_080--Hb_002235_240 Hb_000567_080--Hb_005841_080 Hb_131956_010 Hb_131956_010 Hb_000567_080--Hb_131956_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.193358 0.269888 0 0.0441307 0 0.0610705
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.115462 0.0671152 0

CAGE analysis