Hb_002716_080

Information

Type -
Description -
Location Contig2716: 136226-137132
Sequence    

Annotation

kegg
ID tcc:TCM_015429
description hypothetical protein
nr
ID XP_012086462.1
description PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
swissprot
ID Q9M160
description Uncharacterized protein At4g00950 OS=Arabidopsis thaliana GN=At4g00950 PE=2 SV=1
trembl
ID A0A067K1V7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23924 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002716_080 0.0 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
2 Hb_126077_020 0.107925157 - - Kinase family protein with leucine-rich repeat domain [Theobroma cacao]
3 Hb_002003_020 0.110407556 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
4 Hb_186298_010 0.1186003854 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_003556_060 0.1362293635 - - -
6 Hb_022998_010 0.1410680566 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_000141_220 0.1429707703 - - PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii]
8 Hb_034342_010 0.146103106 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001953_130 0.1468892079 - - PREDICTED: uncharacterized protein LOC105648901 [Jatropha curcas]
10 Hb_001157_150 0.1474793292 - - PREDICTED: transmembrane protein 45A-like [Jatropha curcas]
11 Hb_017866_020 0.1488145187 transcription factor TF Family: WRKY WRKY transcription factor 40 [Jatropha curcas]
12 Hb_001424_080 0.1511992068 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
13 Hb_000265_010 0.1541664455 - - amino acid transporter, putative [Ricinus communis]
14 Hb_004136_050 0.1555160067 - - -
15 Hb_001863_460 0.1573270843 transcription factor TF Family: MYB PREDICTED: protein ODORANT1 [Jatropha curcas]
16 Hb_000077_460 0.1664923734 - - -
17 Hb_019229_020 0.1666264842 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
18 Hb_001663_100 0.1666464132 - - -
19 Hb_006418_010 0.1673585648 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
20 Hb_001283_010 0.1682879514 transcription factor TF Family: LOB LOB domain-containing protein 15 [Populus tremula x Populus tremuloides]

Gene co-expression network

sample Hb_002716_080 Hb_002716_080 Hb_126077_020 Hb_126077_020 Hb_002716_080--Hb_126077_020 Hb_002003_020 Hb_002003_020 Hb_002716_080--Hb_002003_020 Hb_186298_010 Hb_186298_010 Hb_002716_080--Hb_186298_010 Hb_003556_060 Hb_003556_060 Hb_002716_080--Hb_003556_060 Hb_022998_010 Hb_022998_010 Hb_002716_080--Hb_022998_010 Hb_000141_220 Hb_000141_220 Hb_002716_080--Hb_000141_220 Hb_034342_010 Hb_034342_010 Hb_126077_020--Hb_034342_010 Hb_126077_020--Hb_003556_060 Hb_126077_020--Hb_022998_010 Hb_001424_080 Hb_001424_080 Hb_126077_020--Hb_001424_080 Hb_001663_100 Hb_001663_100 Hb_126077_020--Hb_001663_100 Hb_126077_020--Hb_186298_010 Hb_017866_020 Hb_017866_020 Hb_002003_020--Hb_017866_020 Hb_019229_020 Hb_019229_020 Hb_002003_020--Hb_019229_020 Hb_004136_050 Hb_004136_050 Hb_002003_020--Hb_004136_050 Hb_000077_460 Hb_000077_460 Hb_002003_020--Hb_000077_460 Hb_001638_110 Hb_001638_110 Hb_002003_020--Hb_001638_110 Hb_001283_010 Hb_001283_010 Hb_002003_020--Hb_001283_010 Hb_004931_060 Hb_004931_060 Hb_186298_010--Hb_004931_060 Hb_002917_020 Hb_002917_020 Hb_186298_010--Hb_002917_020 Hb_000265_010 Hb_000265_010 Hb_186298_010--Hb_000265_010 Hb_001863_460 Hb_001863_460 Hb_186298_010--Hb_001863_460 Hb_003556_060--Hb_034342_010 Hb_003556_060--Hb_022998_010 Hb_003556_060--Hb_001424_080 Hb_003556_060--Hb_017866_020 Hb_003556_060--Hb_000077_460 Hb_022998_010--Hb_001663_100 Hb_007432_050 Hb_007432_050 Hb_022998_010--Hb_007432_050 Hb_000649_030 Hb_000649_030 Hb_022998_010--Hb_000649_030 Hb_022998_010--Hb_034342_010 Hb_164010_090 Hb_164010_090 Hb_000141_220--Hb_164010_090 Hb_000141_220--Hb_017866_020 Hb_000141_220--Hb_002003_020 Hb_000141_220--Hb_000077_460 Hb_000844_010 Hb_000844_010 Hb_000141_220--Hb_000844_010 Hb_000045_180 Hb_000045_180 Hb_000141_220--Hb_000045_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.742642 0.0583549 0.181603 0.0361235 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.85711 0

CAGE analysis