Hb_002675_130

Information

Type -
Description -
Location Contig2675: 111721-128624
Sequence    

Annotation

kegg
ID rcu:RCOM_0894670
description NMDA receptor-regulated protein, putative
nr
ID XP_012073295.1
description PREDICTED: N-alpha-acetyltransferase 16, NatA auxiliary subunit isoform X1 [Jatropha curcas]
swissprot
ID Q5R4J9
description N-alpha-acetyltransferase 15, NatA auxiliary subunit OS=Pongo abelii GN=NAA15 PE=2 SV=1
trembl
ID A0A067KLQ8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06237 PE=4 SV=1
Gene Ontology
ID GO:0005515
description n-alpha-acetyltransferase auxiliary subunit

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27857: 111753-128775
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002675_130 0.0 - - PREDICTED: N-alpha-acetyltransferase 16, NatA auxiliary subunit isoform X1 [Jatropha curcas]
2 Hb_002234_090 0.0613766944 - - PREDICTED: probable transcriptional regulator SLK2 [Jatropha curcas]
3 Hb_022256_020 0.0640652899 - - PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Jatropha curcas]
4 Hb_004787_050 0.0684827863 - - PREDICTED: RINT1-like protein MAG2 [Jatropha curcas]
5 Hb_001998_240 0.0747859675 - - PREDICTED: small nuclear ribonucleoprotein-associated protein B' [Jatropha curcas]
6 Hb_004916_010 0.0756135221 - - PREDICTED: uncharacterized protein LOC105631086 [Jatropha curcas]
7 Hb_011618_070 0.0802766698 - - NMDA receptor-regulated protein [Medicago truncatula]
8 Hb_001541_290 0.0812316832 - - PREDICTED: uncharacterized protein LOC105644977 [Jatropha curcas]
9 Hb_000484_130 0.0828307923 - - splicing factor, putative [Ricinus communis]
10 Hb_003228_110 0.0835893111 - - PREDICTED: uncharacterized protein LOC105637245 [Jatropha curcas]
11 Hb_003544_060 0.0842056119 - - hypothetical protein JCGZ_22100 [Jatropha curcas]
12 Hb_010068_080 0.0851891919 - - PREDICTED: RNA-binding protein rsd1-like [Jatropha curcas]
13 Hb_003835_070 0.0855458322 - - PREDICTED: uncharacterized protein LOC105641698 isoform X2 [Jatropha curcas]
14 Hb_000107_660 0.0861202729 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
15 Hb_003058_260 0.0876802684 - - hypothetical protein POPTR_0003s13040g [Populus trichocarpa]
16 Hb_105105_010 0.0884858111 - - PREDICTED: coiled-coil domain-containing protein 132 [Jatropha curcas]
17 Hb_000617_230 0.0889822605 - - PREDICTED: tafazzin isoform X1 [Jatropha curcas]
18 Hb_003657_010 0.0903338896 - - conserved hypothetical protein [Ricinus communis]
19 Hb_010712_050 0.0910367765 - - PREDICTED: protein ELC-like [Jatropha curcas]
20 Hb_002217_170 0.0919702946 - - PREDICTED: E3 ubiquitin-protein ligase UPL6-like isoform X1 [Gossypium raimondii]

Gene co-expression network

sample Hb_002675_130 Hb_002675_130 Hb_002234_090 Hb_002234_090 Hb_002675_130--Hb_002234_090 Hb_022256_020 Hb_022256_020 Hb_002675_130--Hb_022256_020 Hb_004787_050 Hb_004787_050 Hb_002675_130--Hb_004787_050 Hb_001998_240 Hb_001998_240 Hb_002675_130--Hb_001998_240 Hb_004916_010 Hb_004916_010 Hb_002675_130--Hb_004916_010 Hb_011618_070 Hb_011618_070 Hb_002675_130--Hb_011618_070 Hb_010712_050 Hb_010712_050 Hb_002234_090--Hb_010712_050 Hb_002234_090--Hb_004916_010 Hb_003835_070 Hb_003835_070 Hb_002234_090--Hb_003835_070 Hb_003768_050 Hb_003768_050 Hb_002234_090--Hb_003768_050 Hb_003544_060 Hb_003544_060 Hb_002234_090--Hb_003544_060 Hb_000484_130 Hb_000484_130 Hb_022256_020--Hb_000484_130 Hb_022256_020--Hb_002234_090 Hb_022256_020--Hb_004916_010 Hb_033772_030 Hb_033772_030 Hb_022256_020--Hb_033772_030 Hb_002818_030 Hb_002818_030 Hb_022256_020--Hb_002818_030 Hb_003058_260 Hb_003058_260 Hb_004787_050--Hb_003058_260 Hb_004787_050--Hb_001998_240 Hb_007894_110 Hb_007894_110 Hb_004787_050--Hb_007894_110 Hb_003943_110 Hb_003943_110 Hb_004787_050--Hb_003943_110 Hb_001635_120 Hb_001635_120 Hb_004787_050--Hb_001635_120 Hb_002053_150 Hb_002053_150 Hb_001998_240--Hb_002053_150 Hb_006816_280 Hb_006816_280 Hb_001998_240--Hb_006816_280 Hb_001998_240--Hb_003058_260 Hb_001998_240--Hb_003943_110 Hb_004916_010--Hb_002818_030 Hb_003849_110 Hb_003849_110 Hb_004916_010--Hb_003849_110 Hb_000029_060 Hb_000029_060 Hb_004916_010--Hb_000029_060 Hb_000015_170 Hb_000015_170 Hb_004916_010--Hb_000015_170 Hb_001716_020 Hb_001716_020 Hb_004916_010--Hb_001716_020 Hb_000243_260 Hb_000243_260 Hb_011618_070--Hb_000243_260 Hb_001488_020 Hb_001488_020 Hb_011618_070--Hb_001488_020 Hb_003758_010 Hb_003758_010 Hb_011618_070--Hb_003758_010 Hb_002631_210 Hb_002631_210 Hb_011618_070--Hb_002631_210 Hb_002042_050 Hb_002042_050 Hb_011618_070--Hb_002042_050 Hb_000206_160 Hb_000206_160 Hb_011618_070--Hb_000206_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.33431 14.1288 11.0364 8.00166 5.48792 7.5636
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.38274 8.12164 13.235 12.877 9.59029

CAGE analysis