Hb_002078_060

Information

Type -
Description -
Location Contig2078: 38007-38321
Sequence    

Annotation

kegg
ID rcu:RCOM_1080840
description hypothetical protein
nr
ID KDP26785.1
description hypothetical protein JCGZ_17943 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K3G5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17943 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002078_060 0.0 - - hypothetical protein JCGZ_17943 [Jatropha curcas]
2 Hb_000414_030 0.2230858541 - - -
3 Hb_068946_010 0.2380838527 - - hypothetical protein CICLE_v100122621mg, partial [Citrus clementina]
4 Hb_000062_420 0.2411747704 - - conserved hypothetical protein [Ricinus communis]
5 Hb_032496_020 0.2496145353 - - -
6 Hb_094947_010 0.2510436722 - - surfeit locus protein, putative [Ricinus communis]
7 Hb_002639_060 0.2541259652 - - -
8 Hb_000878_130 0.2555718104 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004137_080 0.2566072643 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001662_160 0.2580685995 - - hypothetical protein PRUPE_ppa021315mg [Prunus persica]
11 Hb_007747_190 0.2586065117 - - conserved hypothetical protein [Ricinus communis]
12 Hb_034722_010 0.2626832732 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial [Populus euphratica]
13 Hb_002205_050 0.26367764 - - hypothetical protein JCGZ_03335 [Jatropha curcas]
14 Hb_002849_040 0.2719141082 - - caax prenyl protease ste24, putative [Ricinus communis]
15 Hb_005916_030 0.2733390451 - - PREDICTED: uncharacterized protein At2g29880-like [Jatropha curcas]
16 Hb_003747_040 0.274127887 - - -
17 Hb_000891_040 0.2744057211 - - hypothetical protein JCGZ_11252 [Jatropha curcas]
18 Hb_000144_090 0.2760818804 transcription factor TF Family: GNAT Glucosamine 6-phosphate N-acetyltransferase, putative [Ricinus communis]
19 Hb_020902_010 0.2774301635 - - PREDICTED: uncharacterized protein LOC104595551 [Nelumbo nucifera]
20 Hb_000162_100 0.2777894589 - - PREDICTED: uncharacterized protein LOC105638832 [Jatropha curcas]

Gene co-expression network

sample Hb_002078_060 Hb_002078_060 Hb_000414_030 Hb_000414_030 Hb_002078_060--Hb_000414_030 Hb_068946_010 Hb_068946_010 Hb_002078_060--Hb_068946_010 Hb_000062_420 Hb_000062_420 Hb_002078_060--Hb_000062_420 Hb_032496_020 Hb_032496_020 Hb_002078_060--Hb_032496_020 Hb_094947_010 Hb_094947_010 Hb_002078_060--Hb_094947_010 Hb_002639_060 Hb_002639_060 Hb_002078_060--Hb_002639_060 Hb_000878_130 Hb_000878_130 Hb_000414_030--Hb_000878_130 Hb_000414_030--Hb_032496_020 Hb_001105_190 Hb_001105_190 Hb_000414_030--Hb_001105_190 Hb_001054_130 Hb_001054_130 Hb_000414_030--Hb_001054_130 Hb_000329_770 Hb_000329_770 Hb_000414_030--Hb_000329_770 Hb_015057_010 Hb_015057_010 Hb_000414_030--Hb_015057_010 Hb_027445_060 Hb_027445_060 Hb_068946_010--Hb_027445_060 Hb_001095_060 Hb_001095_060 Hb_068946_010--Hb_001095_060 Hb_001488_110 Hb_001488_110 Hb_068946_010--Hb_001488_110 Hb_004072_010 Hb_004072_010 Hb_068946_010--Hb_004072_010 Hb_004968_060 Hb_004968_060 Hb_068946_010--Hb_004968_060 Hb_005935_010 Hb_005935_010 Hb_068946_010--Hb_005935_010 Hb_000364_150 Hb_000364_150 Hb_000062_420--Hb_000364_150 Hb_022092_090 Hb_022092_090 Hb_000062_420--Hb_022092_090 Hb_002197_030 Hb_002197_030 Hb_000062_420--Hb_002197_030 Hb_000062_420--Hb_094947_010 Hb_009543_030 Hb_009543_030 Hb_000062_420--Hb_009543_030 Hb_009558_020 Hb_009558_020 Hb_000062_420--Hb_009558_020 Hb_032496_020--Hb_001105_190 Hb_032496_020--Hb_000062_420 Hb_032496_020--Hb_002639_060 Hb_002067_020 Hb_002067_020 Hb_032496_020--Hb_002067_020 Hb_007426_160 Hb_007426_160 Hb_032496_020--Hb_007426_160 Hb_000123_260 Hb_000123_260 Hb_094947_010--Hb_000123_260 Hb_004055_140 Hb_004055_140 Hb_094947_010--Hb_004055_140 Hb_001258_040 Hb_001258_040 Hb_094947_010--Hb_001258_040 Hb_001488_330 Hb_001488_330 Hb_094947_010--Hb_001488_330 Hb_000274_020 Hb_000274_020 Hb_094947_010--Hb_000274_020 Hb_001157_060 Hb_001157_060 Hb_094947_010--Hb_001157_060 Hb_007926_040 Hb_007926_040 Hb_002639_060--Hb_007926_040 Hb_002205_050 Hb_002205_050 Hb_002639_060--Hb_002205_050 Hb_007101_200 Hb_007101_200 Hb_002639_060--Hb_007101_200 Hb_009543_020 Hb_009543_020 Hb_002639_060--Hb_009543_020 Hb_003786_020 Hb_003786_020 Hb_002639_060--Hb_003786_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.835747 0.384613 0 0 0.284384 3.14577
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.332023 1.82891 0.76157 0.360267 0.414522

CAGE analysis