Hb_001811_160

Information

Type -
Description -
Location Contig1811: 102158-110941
Sequence    

Annotation

kegg
ID egr:104414105
description probable glycosyltransferase At5g03795
nr
ID XP_010023426.1
description PREDICTED: probable glycosyltransferase At5g03795 [Eucalyptus grandis]
swissprot
ID Q9FFN2
description Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2
trembl
ID A0A059B0X7
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02436 PE=4 SV=1
Gene Ontology
ID GO:0016740
description probable glycosyltransferase at5g03795

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001811_160 0.0 - - PREDICTED: probable glycosyltransferase At5g03795 [Eucalyptus grandis]
2 Hb_000487_260 0.1123624009 - - PREDICTED: protein Iojap, chloroplastic [Jatropha curcas]
3 Hb_001935_100 0.1237540458 - - structural molecule, putative [Ricinus communis]
4 Hb_019053_060 0.1265751483 - - PREDICTED: uncharacterized protein LOC105632672 [Jatropha curcas]
5 Hb_005539_010 0.1429015598 - - PREDICTED: uncharacterized protein LOC105644585 [Jatropha curcas]
6 Hb_000462_090 0.1447385327 - - PREDICTED: carotene epsilon-monooxygenase, chloroplastic [Jatropha curcas]
7 Hb_001195_460 0.1452439478 - - PREDICTED: outer envelope pore protein 24B, chloroplastic-like [Jatropha curcas]
8 Hb_000796_160 0.146836345 - - PREDICTED: nifU-like protein 1, chloroplastic [Jatropha curcas]
9 Hb_000025_780 0.1484331967 - - PREDICTED: sanguinarine reductase [Jatropha curcas]
10 Hb_000349_270 0.1492918 - - PREDICTED: uncharacterized protein ycf49 isoform X1 [Jatropha curcas]
11 Hb_000340_150 0.1493623789 - - hypothetical protein JCGZ_21975 [Jatropha curcas]
12 Hb_005389_170 0.1499094457 - - PREDICTED: probable lactoylglutathione lyase, chloroplast isoform X1 [Jatropha curcas]
13 Hb_000811_070 0.1504261909 - - PREDICTED: uncharacterized protein LOC105650695 [Jatropha curcas]
14 Hb_000227_170 0.1532426252 - - dead box ATP-dependent RNA helicase, putative [Ricinus communis]
15 Hb_007416_050 0.153678565 transcription factor TF Family: Orphans PREDICTED: histidine kinase 5 [Jatropha curcas]
16 Hb_001623_130 0.1550494822 - - PREDICTED: GDT1-like protein 2, chloroplastic isoform X1 [Jatropha curcas]
17 Hb_000051_060 0.155640569 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001277_100 0.156788191 - - PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-like isoform X1 [Gossypium raimondii]
19 Hb_001369_610 0.1575565295 - - PREDICTED: protein LOW PSII ACCUMULATION 2, chloroplastic [Jatropha curcas]
20 Hb_000173_250 0.1576013104 - - PREDICTED: ribonucleoside-diphosphate reductase small chain A [Jatropha curcas]

Gene co-expression network

sample Hb_001811_160 Hb_001811_160 Hb_000487_260 Hb_000487_260 Hb_001811_160--Hb_000487_260 Hb_001935_100 Hb_001935_100 Hb_001811_160--Hb_001935_100 Hb_019053_060 Hb_019053_060 Hb_001811_160--Hb_019053_060 Hb_005539_010 Hb_005539_010 Hb_001811_160--Hb_005539_010 Hb_000462_090 Hb_000462_090 Hb_001811_160--Hb_000462_090 Hb_001195_460 Hb_001195_460 Hb_001811_160--Hb_001195_460 Hb_000811_070 Hb_000811_070 Hb_000487_260--Hb_000811_070 Hb_006846_150 Hb_006846_150 Hb_000487_260--Hb_006846_150 Hb_000487_260--Hb_019053_060 Hb_000796_160 Hb_000796_160 Hb_000487_260--Hb_000796_160 Hb_000487_260--Hb_001935_100 Hb_008421_020 Hb_008421_020 Hb_000487_260--Hb_008421_020 Hb_000051_060 Hb_000051_060 Hb_001935_100--Hb_000051_060 Hb_000227_170 Hb_000227_170 Hb_001935_100--Hb_000227_170 Hb_001935_100--Hb_005539_010 Hb_001410_070 Hb_001410_070 Hb_001935_100--Hb_001410_070 Hb_001935_100--Hb_000796_160 Hb_005946_040 Hb_005946_040 Hb_001935_100--Hb_005946_040 Hb_009252_060 Hb_009252_060 Hb_019053_060--Hb_009252_060 Hb_000173_250 Hb_000173_250 Hb_019053_060--Hb_000173_250 Hb_019053_060--Hb_001935_100 Hb_019053_060--Hb_001410_070 Hb_001946_160 Hb_001946_160 Hb_019053_060--Hb_001946_160 Hb_006538_120 Hb_006538_120 Hb_005539_010--Hb_006538_120 Hb_000212_440 Hb_000212_440 Hb_005539_010--Hb_000212_440 Hb_000941_100 Hb_000941_100 Hb_005539_010--Hb_000941_100 Hb_005539_010--Hb_000227_170 Hb_012150_030 Hb_012150_030 Hb_005539_010--Hb_012150_030 Hb_001584_200 Hb_001584_200 Hb_000462_090--Hb_001584_200 Hb_000462_090--Hb_000173_250 Hb_000340_150 Hb_000340_150 Hb_000462_090--Hb_000340_150 Hb_000172_580 Hb_000172_580 Hb_000462_090--Hb_000172_580 Hb_009775_010 Hb_009775_010 Hb_000462_090--Hb_009775_010 Hb_003376_230 Hb_003376_230 Hb_000462_090--Hb_003376_230 Hb_001195_460--Hb_001935_100 Hb_107879_010 Hb_107879_010 Hb_001195_460--Hb_107879_010 Hb_004440_020 Hb_004440_020 Hb_001195_460--Hb_004440_020 Hb_001195_460--Hb_000227_170 Hb_029866_120 Hb_029866_120 Hb_001195_460--Hb_029866_120 Hb_001195_460--Hb_000051_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0327973 0.0608765 0.180441 0.0709263 0.126532 0.0579261
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0930705 0.161117 0.0836822 0.0232738 0.217694

CAGE analysis