Hb_001804_080

Information

Type -
Description -
Location Contig1804: 151538-164563
Sequence    

Annotation

kegg
ID rcu:RCOM_1157660
description aldo-keto reductase, putative (EC:1.1.1.21)
nr
ID XP_012087996.1
description PREDICTED: aldo-keto reductase family 4 member C9-like [Jatropha curcas]
swissprot
ID Q0PGJ6
description Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1
trembl
ID A0A067JKP1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25115 PE=4 SV=1
Gene Ontology
ID GO:0005759
description aldo-keto reductase family 4 member c9-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17458: 152298-156316 , PASA_asmbl_17459: 158889-160847
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001804_080 0.0 - - PREDICTED: aldo-keto reductase family 4 member C9-like [Jatropha curcas]
2 Hb_000946_090 0.0615837688 - - PREDICTED: cyclin-C1-2-like isoform X2 [Jatropha curcas]
3 Hb_000116_490 0.0730034998 - - PREDICTED: WD repeat-containing protein 55 homolog [Jatropha curcas]
4 Hb_032202_100 0.0819418371 desease resistance Gene Name: ArsA_ATPase arsenical pump-driving atpase, putative [Ricinus communis]
5 Hb_000270_310 0.0907919955 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like [Populus euphratica]
6 Hb_002307_180 0.091871487 - - PREDICTED: rRNA-processing protein EFG1 isoform X2 [Jatropha curcas]
7 Hb_005245_120 0.0923444027 - - XPA-binding protein, putative [Ricinus communis]
8 Hb_000099_150 0.0969587354 - - PREDICTED: calcium-dependent protein kinase 3 [Jatropha curcas]
9 Hb_000419_020 0.0986769146 - - PREDICTED: aminodeoxychorismate synthase, chloroplastic isoform X1 [Jatropha curcas]
10 Hb_001931_010 0.0989863023 - - PREDICTED: NADH--cytochrome b5 reductase 1-like [Jatropha curcas]
11 Hb_006846_130 0.0998095295 - - PREDICTED: carbonyl reductase [NADPH] 1-like [Jatropha curcas]
12 Hb_161574_020 0.10033137 - - PREDICTED: ubiquitin fusion degradation protein 1 homolog [Jatropha curcas]
13 Hb_004984_030 0.1005453928 - - protein with unknown function [Ricinus communis]
14 Hb_015299_030 0.101292325 - - PREDICTED: proteasome subunit alpha type-7 [Jatropha curcas]
15 Hb_002811_170 0.1015049799 - - PREDICTED: 40S ribosomal protein S3a-1 [Jatropha curcas]
16 Hb_000185_050 0.1015478628 - - PREDICTED: FKBP12-interacting protein of 37 kDa [Jatropha curcas]
17 Hb_000130_270 0.1030452115 - - PREDICTED: malate dehydrogenase, mitochondrial [Jatropha curcas]
18 Hb_002171_060 0.1045329297 - - conserved hypothetical protein [Ricinus communis]
19 Hb_098315_020 0.1056975893 - - hypothetical protein M569_15712 [Genlisea aurea]
20 Hb_040819_010 0.1067522915 - - protein phosphatase 2c, putative [Ricinus communis]

Gene co-expression network

sample Hb_001804_080 Hb_001804_080 Hb_000946_090 Hb_000946_090 Hb_001804_080--Hb_000946_090 Hb_000116_490 Hb_000116_490 Hb_001804_080--Hb_000116_490 Hb_032202_100 Hb_032202_100 Hb_001804_080--Hb_032202_100 Hb_000270_310 Hb_000270_310 Hb_001804_080--Hb_000270_310 Hb_002307_180 Hb_002307_180 Hb_001804_080--Hb_002307_180 Hb_005245_120 Hb_005245_120 Hb_001804_080--Hb_005245_120 Hb_001931_010 Hb_001931_010 Hb_000946_090--Hb_001931_010 Hb_000419_020 Hb_000419_020 Hb_000946_090--Hb_000419_020 Hb_006326_040 Hb_006326_040 Hb_000946_090--Hb_006326_040 Hb_000946_090--Hb_032202_100 Hb_002968_040 Hb_002968_040 Hb_000946_090--Hb_002968_040 Hb_005288_130 Hb_005288_130 Hb_000116_490--Hb_005288_130 Hb_000116_490--Hb_032202_100 Hb_000116_490--Hb_000946_090 Hb_002303_020 Hb_002303_020 Hb_000116_490--Hb_002303_020 Hb_000116_490--Hb_000270_310 Hb_000130_270 Hb_000130_270 Hb_032202_100--Hb_000130_270 Hb_000926_200 Hb_000926_200 Hb_032202_100--Hb_000926_200 Hb_155215_020 Hb_155215_020 Hb_032202_100--Hb_155215_020 Hb_000035_160 Hb_000035_160 Hb_032202_100--Hb_000035_160 Hb_161574_020 Hb_161574_020 Hb_032202_100--Hb_161574_020 Hb_000270_310--Hb_161574_020 Hb_001278_100 Hb_001278_100 Hb_000270_310--Hb_001278_100 Hb_000086_170 Hb_000086_170 Hb_000270_310--Hb_000086_170 Hb_002936_010 Hb_002936_010 Hb_000270_310--Hb_002936_010 Hb_164010_040 Hb_164010_040 Hb_000270_310--Hb_164010_040 Hb_007878_010 Hb_007878_010 Hb_000270_310--Hb_007878_010 Hb_000690_190 Hb_000690_190 Hb_002307_180--Hb_000690_190 Hb_000599_260 Hb_000599_260 Hb_002307_180--Hb_000599_260 Hb_012565_070 Hb_012565_070 Hb_002307_180--Hb_012565_070 Hb_002307_180--Hb_000270_310 Hb_000270_470 Hb_000270_470 Hb_002307_180--Hb_000270_470 Hb_002307_180--Hb_032202_100 Hb_005245_120--Hb_032202_100 Hb_005245_120--Hb_000926_200 Hb_005245_120--Hb_000116_490 Hb_001357_310 Hb_001357_310 Hb_005245_120--Hb_001357_310 Hb_001191_080 Hb_001191_080 Hb_005245_120--Hb_001191_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.76891 2.52326 5.75241 4.93511 2.01129 1.81023
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.78321 7.92798 2.32305 3.78197 2.45423

CAGE analysis