Hb_001488_080

Information

Type -
Description -
Location Contig1488: 70909-72643
Sequence    

Annotation

kegg
ID rcu:RCOM_0525650
description UDP-glucuronosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_002526107.1
description UDP-glucuronosyltransferase, putative [Ricinus communis]
swissprot
ID Q9SGA8
description UDP-glycosyltransferase 83A1 OS=Arabidopsis thaliana GN=UGT83A1 PE=2 SV=1
trembl
ID B9SJD8
description UDP-glucuronosyltransferase, putative OS=Ricinus communis GN=RCOM_0525650 PE=4 SV=1
Gene Ontology
ID GO:0047213
description udp-glycosyltransferase 83a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001488_080 0.0 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
2 Hb_007943_170 0.094043158 - - PREDICTED: rho guanine nucleotide exchange factor 8-like [Jatropha curcas]
3 Hb_001301_140 0.1239320185 - - PREDICTED: TMV resistance protein N-like [Jatropha curcas]
4 Hb_007558_110 0.1629335163 - - PREDICTED: uncharacterized protein LOC105649093 [Jatropha curcas]
5 Hb_000035_190 0.1856173062 - - conserved hypothetical protein [Ricinus communis]
6 Hb_007120_020 0.1873261684 - - conserved hypothetical protein [Ricinus communis]
7 Hb_005066_050 0.1995684472 - - -
8 Hb_001864_040 0.2042028379 - - PREDICTED: kinesin-1 [Jatropha curcas]
9 Hb_008725_110 0.2081820606 - - PREDICTED: leucine-rich repeat extensin-like protein 1 [Jatropha curcas]
10 Hb_000025_770 0.2102274006 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
11 Hb_000000_040 0.2106404074 - - PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Jatropha curcas]
12 Hb_061361_010 0.2120856396 - - kinase, putative [Ricinus communis]
13 Hb_011063_030 0.2181324524 - - protein with unknown function [Ricinus communis]
14 Hb_000763_030 0.2181339097 - - Taxadien-5-alpha-ol O-acetyltransferase, putative [Ricinus communis]
15 Hb_000176_040 0.220380007 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHR3 isoform X2 [Jatropha curcas]
16 Hb_000362_140 0.2211840875 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 61-like [Jatropha curcas]
17 Hb_001235_040 0.2218384416 - - hypothetical protein POPTR_0001s47470g [Populus trichocarpa]
18 Hb_162378_020 0.222364471 transcription factor TF Family: HMG PREDICTED: high mobility group B protein 13-like [Populus euphratica]
19 Hb_003018_210 0.2230721027 - - PREDICTED: uncharacterized protein LOC105138721 isoform X2 [Populus euphratica]
20 Hb_001454_180 0.2232341108 - - PREDICTED: uncharacterized protein LOC105643432 [Jatropha curcas]

Gene co-expression network

sample Hb_001488_080 Hb_001488_080 Hb_007943_170 Hb_007943_170 Hb_001488_080--Hb_007943_170 Hb_001301_140 Hb_001301_140 Hb_001488_080--Hb_001301_140 Hb_007558_110 Hb_007558_110 Hb_001488_080--Hb_007558_110 Hb_000035_190 Hb_000035_190 Hb_001488_080--Hb_000035_190 Hb_007120_020 Hb_007120_020 Hb_001488_080--Hb_007120_020 Hb_005066_050 Hb_005066_050 Hb_001488_080--Hb_005066_050 Hb_007943_170--Hb_001301_140 Hb_000365_150 Hb_000365_150 Hb_007943_170--Hb_000365_150 Hb_007943_170--Hb_007558_110 Hb_000621_100 Hb_000621_100 Hb_007943_170--Hb_000621_100 Hb_006120_140 Hb_006120_140 Hb_007943_170--Hb_006120_140 Hb_000345_180 Hb_000345_180 Hb_001301_140--Hb_000345_180 Hb_001301_140--Hb_000365_150 Hb_003159_060 Hb_003159_060 Hb_001301_140--Hb_003159_060 Hb_001301_140--Hb_007558_110 Hb_001864_040 Hb_001864_040 Hb_007558_110--Hb_001864_040 Hb_007558_110--Hb_000035_190 Hb_001454_180 Hb_001454_180 Hb_007558_110--Hb_001454_180 Hb_162378_020 Hb_162378_020 Hb_007558_110--Hb_162378_020 Hb_004963_020 Hb_004963_020 Hb_007558_110--Hb_004963_020 Hb_011063_030 Hb_011063_030 Hb_007558_110--Hb_011063_030 Hb_003018_210 Hb_003018_210 Hb_000035_190--Hb_003018_210 Hb_001699_070 Hb_001699_070 Hb_000035_190--Hb_001699_070 Hb_003398_050 Hb_003398_050 Hb_000035_190--Hb_003398_050 Hb_003368_070 Hb_003368_070 Hb_000035_190--Hb_003368_070 Hb_000035_190--Hb_162378_020 Hb_001220_020 Hb_001220_020 Hb_000035_190--Hb_001220_020 Hb_001952_100 Hb_001952_100 Hb_007120_020--Hb_001952_100 Hb_000763_030 Hb_000763_030 Hb_007120_020--Hb_000763_030 Hb_000227_010 Hb_000227_010 Hb_007120_020--Hb_000227_010 Hb_004722_050 Hb_004722_050 Hb_007120_020--Hb_004722_050 Hb_001926_050 Hb_001926_050 Hb_007120_020--Hb_001926_050 Hb_000514_010 Hb_000514_010 Hb_007120_020--Hb_000514_010 Hb_000025_770 Hb_000025_770 Hb_005066_050--Hb_000025_770 Hb_061361_010 Hb_061361_010 Hb_005066_050--Hb_061361_010 Hb_000000_040 Hb_000000_040 Hb_005066_050--Hb_000000_040 Hb_005066_050--Hb_000621_100 Hb_008725_110 Hb_008725_110 Hb_005066_050--Hb_008725_110 Hb_001205_280 Hb_001205_280 Hb_005066_050--Hb_001205_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0153165 0 0.139476 0.0361308 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0109835 0

CAGE analysis