Hb_001282_030

Information

Type -
Description -
Location Contig1282: 74039-75317
Sequence    

Annotation

kegg
ID bvg:104900936
description uncharacterized LOC104900936
nr
ID KDP42289.1
description hypothetical protein JCGZ_01613 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LDZ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01613 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001282_030 0.0 - - hypothetical protein JCGZ_01613 [Jatropha curcas]
2 Hb_115656_010 0.2013007224 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Jatropha curcas]
3 Hb_012092_080 0.2070917525 - - PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like [Malus domestica]
4 Hb_086607_010 0.2455430649 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
5 Hb_001523_030 0.2465851548 - - protein binding protein, putative [Ricinus communis]
6 Hb_057451_040 0.2593988701 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
7 Hb_004212_040 0.2684959665 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
8 Hb_000475_050 0.2706481386 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
9 Hb_012305_090 0.2746106339 - - hypothetical protein VITISV_018166 [Vitis vinifera]
10 Hb_097021_010 0.277698569 - - hypothetical protein POPTR_0075s00200g, partial [Populus trichocarpa]
11 Hb_002729_020 0.2783077081 - - PREDICTED: uncharacterized protein LOC104804969, partial [Tarenaya hassleriana]
12 Hb_005396_060 0.2829646643 - - -
13 Hb_002791_020 0.2837665153 - - hypothetical protein AALP_AA5G271700 [Arabis alpina]
14 Hb_001341_020 0.2896251506 - - Uncharacterised protein [Bordetella pertussis]
15 Hb_170559_010 0.2902284035 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
16 Hb_049275_010 0.2947204323 - - PREDICTED: F-box/LRR-repeat protein 4-like [Populus euphratica]
17 Hb_001188_120 0.2968947167 - - hypothetical protein JCGZ_05575 [Jatropha curcas]
18 Hb_001446_010 0.3029688176 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
19 Hb_013420_040 0.3073341928 - - unnamed protein product [Vitis vinifera]
20 Hb_005016_110 0.3159548882 - - -

Gene co-expression network

sample Hb_001282_030 Hb_001282_030 Hb_115656_010 Hb_115656_010 Hb_001282_030--Hb_115656_010 Hb_012092_080 Hb_012092_080 Hb_001282_030--Hb_012092_080 Hb_086607_010 Hb_086607_010 Hb_001282_030--Hb_086607_010 Hb_001523_030 Hb_001523_030 Hb_001282_030--Hb_001523_030 Hb_057451_040 Hb_057451_040 Hb_001282_030--Hb_057451_040 Hb_004212_040 Hb_004212_040 Hb_001282_030--Hb_004212_040 Hb_115656_010--Hb_057451_040 Hb_115656_010--Hb_004212_040 Hb_002025_090 Hb_002025_090 Hb_115656_010--Hb_002025_090 Hb_115656_010--Hb_012092_080 Hb_142570_010 Hb_142570_010 Hb_115656_010--Hb_142570_010 Hb_097021_010 Hb_097021_010 Hb_012092_080--Hb_097021_010 Hb_041813_050 Hb_041813_050 Hb_012092_080--Hb_041813_050 Hb_012092_080--Hb_001523_030 Hb_012463_010 Hb_012463_010 Hb_012092_080--Hb_012463_010 Hb_041813_010 Hb_041813_010 Hb_012092_080--Hb_041813_010 Hb_012305_090 Hb_012305_090 Hb_086607_010--Hb_012305_090 Hb_005396_060 Hb_005396_060 Hb_086607_010--Hb_005396_060 Hb_024411_010 Hb_024411_010 Hb_086607_010--Hb_024411_010 Hb_002729_020 Hb_002729_020 Hb_086607_010--Hb_002729_020 Hb_000711_020 Hb_000711_020 Hb_086607_010--Hb_000711_020 Hb_053998_020 Hb_053998_020 Hb_001523_030--Hb_053998_020 Hb_062192_060 Hb_062192_060 Hb_001523_030--Hb_062192_060 Hb_013420_040 Hb_013420_040 Hb_001523_030--Hb_013420_040 Hb_001523_030--Hb_097021_010 Hb_000268_100 Hb_000268_100 Hb_057451_040--Hb_000268_100 Hb_011478_010 Hb_011478_010 Hb_057451_040--Hb_011478_010 Hb_003711_030 Hb_003711_030 Hb_057451_040--Hb_003711_030 Hb_057451_040--Hb_004212_040 Hb_057451_040--Hb_002025_090 Hb_032531_010 Hb_032531_010 Hb_004212_040--Hb_032531_010 Hb_050334_010 Hb_050334_010 Hb_004212_040--Hb_050334_010 Hb_000940_190 Hb_000940_190 Hb_004212_040--Hb_000940_190 Hb_099723_010 Hb_099723_010 Hb_004212_040--Hb_099723_010 Hb_065943_010 Hb_065943_010 Hb_004212_040--Hb_065943_010 Hb_006157_050 Hb_006157_050 Hb_004212_040--Hb_006157_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.02255 0.0300477 0 0 0 0.015895
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0604045 0.0651067 0.134391

CAGE analysis