Hb_000711_020

Information

Type -
Description -
Location Contig711: 11172-21849
Sequence    

Annotation

kegg
ID tcc:TCM_021287
description Major allergen Pru ar 1 isoform 1
nr
ID NP_001295743.1
description major allergen Pru ar 1-like [Jatropha curcas]
swissprot
ID O50001
description Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 SV=1
trembl
ID D2D960
description Major allergen Pru ar 1-like protein OS=Jatropha curcas GN=JCGZ_18949 PE=2 SV=1
Gene Ontology
ID GO:0006952
description major allergen pru ar 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000711_020 0.0 - - major allergen Pru ar 1-like [Jatropha curcas]
2 Hb_014548_030 0.1973489017 - - PREDICTED: uncharacterized protein LOC104897580 [Beta vulgaris subsp. vulgaris]
3 Hb_012305_090 0.2163490904 - - hypothetical protein VITISV_018166 [Vitis vinifera]
4 Hb_006569_050 0.230510101 - - -
5 Hb_049275_010 0.2471465045 - - PREDICTED: F-box/LRR-repeat protein 4-like [Populus euphratica]
6 Hb_001446_010 0.2515676128 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
7 Hb_086607_010 0.2564091033 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
8 Hb_057451_040 0.2616521381 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
9 Hb_005396_060 0.2639714197 - - -
10 Hb_000101_260 0.2689760423 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_100288_010 0.2811540875 - - PREDICTED: uncharacterized protein LOC104901272 [Beta vulgaris subsp. vulgaris]
12 Hb_012338_030 0.2887206188 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
13 Hb_003805_070 0.3036418079 - - PREDICTED: sacsin [Jatropha curcas]
14 Hb_002791_020 0.3042637462 - - hypothetical protein AALP_AA5G271700 [Arabis alpina]
15 Hb_003944_020 0.3063178879 - - PREDICTED: uncharacterized protein LOC105110580 [Populus euphratica]
16 Hb_080761_010 0.3068615931 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
17 Hb_000076_050 0.3112458793 - - PREDICTED: uncharacterized protein LOC105155919 [Sesamum indicum]
18 Hb_001206_010 0.3162430418 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
19 Hb_170156_010 0.3195370876 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
20 Hb_005523_010 0.3270045424 transcription factor TF Family: PHD PREDICTED: helicase protein MOM1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000711_020 Hb_000711_020 Hb_014548_030 Hb_014548_030 Hb_000711_020--Hb_014548_030 Hb_012305_090 Hb_012305_090 Hb_000711_020--Hb_012305_090 Hb_006569_050 Hb_006569_050 Hb_000711_020--Hb_006569_050 Hb_049275_010 Hb_049275_010 Hb_000711_020--Hb_049275_010 Hb_001446_010 Hb_001446_010 Hb_000711_020--Hb_001446_010 Hb_086607_010 Hb_086607_010 Hb_000711_020--Hb_086607_010 Hb_014548_030--Hb_012305_090 Hb_100288_010 Hb_100288_010 Hb_014548_030--Hb_100288_010 Hb_148593_010 Hb_148593_010 Hb_014548_030--Hb_148593_010 Hb_003805_070 Hb_003805_070 Hb_014548_030--Hb_003805_070 Hb_012305_110 Hb_012305_110 Hb_014548_030--Hb_012305_110 Hb_012305_090--Hb_086607_010 Hb_005396_060 Hb_005396_060 Hb_012305_090--Hb_005396_060 Hb_001341_020 Hb_001341_020 Hb_012305_090--Hb_001341_020 Hb_115656_010 Hb_115656_010 Hb_012305_090--Hb_115656_010 Hb_005523_010 Hb_005523_010 Hb_006569_050--Hb_005523_010 Hb_002374_250 Hb_002374_250 Hb_006569_050--Hb_002374_250 Hb_000705_250 Hb_000705_250 Hb_006569_050--Hb_000705_250 Hb_000529_140 Hb_000529_140 Hb_006569_050--Hb_000529_140 Hb_080761_010 Hb_080761_010 Hb_006569_050--Hb_080761_010 Hb_005754_030 Hb_005754_030 Hb_006569_050--Hb_005754_030 Hb_049275_010--Hb_005396_060 Hb_012092_080 Hb_012092_080 Hb_049275_010--Hb_012092_080 Hb_000022_140 Hb_000022_140 Hb_049275_010--Hb_000022_140 Hb_066487_010 Hb_066487_010 Hb_049275_010--Hb_066487_010 Hb_049275_010--Hb_006569_050 Hb_003944_020 Hb_003944_020 Hb_049275_010--Hb_003944_020 Hb_057451_040 Hb_057451_040 Hb_001446_010--Hb_057451_040 Hb_001446_010--Hb_005396_060 Hb_001446_010--Hb_049275_010 Hb_001446_010--Hb_086607_010 Hb_001446_010--Hb_115656_010 Hb_086607_010--Hb_005396_060 Hb_024411_010 Hb_024411_010 Hb_086607_010--Hb_024411_010 Hb_001282_030 Hb_001282_030 Hb_086607_010--Hb_001282_030 Hb_002729_020 Hb_002729_020 Hb_086607_010--Hb_002729_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0899592 0.043045 0 0.0494919 0.188551
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.16534 0.0799062 0.365238

CAGE analysis