Hb_000991_050

Information

Type -
Description -
Location Contig991: 64816-67461
Sequence    

Annotation

kegg
ID pop:POPTR_0006s08830g
description POPTRDRAFT_416625; hypothetical protein
nr
ID XP_012074975.1
description PREDICTED: uncharacterized protein LOC105636325 [Jatropha curcas]
swissprot
ID Q5AYT7
description Hsp70 nucleotide exchange factor fes1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fes1 PE=3 SV=1
trembl
ID A0A067KV00
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09102 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64773: 64758-67364
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000991_050 0.0 - - PREDICTED: uncharacterized protein LOC105636325 [Jatropha curcas]
2 Hb_000015_160 0.1072312019 - - Heat shock cognate 70 kDa protein 1 [Triticum urartu]
3 Hb_012753_040 0.1189340973 - - PREDICTED: F-box protein PP2-A12 isoform X1 [Jatropha curcas]
4 Hb_002774_150 0.1354850383 - - PREDICTED: F-box protein At1g22220 [Jatropha curcas]
5 Hb_009674_080 0.1573354857 - - PREDICTED: branchpoint-bridging protein [Jatropha curcas]
6 Hb_004324_060 0.1582807588 - - Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
7 Hb_000139_180 0.1583929469 - - PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Jatropha curcas]
8 Hb_000922_220 0.1662477827 - - PREDICTED: serine/threonine-protein kinase ATM-like [Jatropha curcas]
9 Hb_069841_010 0.1681657903 - - resistance protein [Quercus suber]
10 Hb_012038_010 0.1690935528 - - phospholipid-transporting atpase, putative [Ricinus communis]
11 Hb_002804_030 0.1707213321 - - PREDICTED: probable protein phosphatase 2C 4 [Jatropha curcas]
12 Hb_001079_030 0.1714162831 - - PREDICTED: splicing factor U2af small subunit B-like [Jatropha curcas]
13 Hb_000631_140 0.1724441954 - - PREDICTED: chaperone protein ClpB1 [Jatropha curcas]
14 Hb_004994_300 0.1780660588 - - synaptotagmin, putative [Ricinus communis]
15 Hb_000027_180 0.1854661213 - - PREDICTED: uncharacterized protein LOC105642058 [Jatropha curcas]
16 Hb_010921_020 0.1856295934 - - PREDICTED: cyclin-SDS [Jatropha curcas]
17 Hb_172421_010 0.1865694179 - - cysteine protease [Hevea brasiliensis]
18 Hb_000127_190 0.1866588741 - - PREDICTED: protein GIGANTEA [Jatropha curcas]
19 Hb_007313_070 0.1867914027 - - PREDICTED: gibberellin receptor GID1C [Jatropha curcas]
20 Hb_006573_010 0.1873870961 - - heat shock protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_000991_050 Hb_000991_050 Hb_000015_160 Hb_000015_160 Hb_000991_050--Hb_000015_160 Hb_012753_040 Hb_012753_040 Hb_000991_050--Hb_012753_040 Hb_002774_150 Hb_002774_150 Hb_000991_050--Hb_002774_150 Hb_009674_080 Hb_009674_080 Hb_000991_050--Hb_009674_080 Hb_004324_060 Hb_004324_060 Hb_000991_050--Hb_004324_060 Hb_000139_180 Hb_000139_180 Hb_000991_050--Hb_000139_180 Hb_000015_160--Hb_012753_040 Hb_002387_070 Hb_002387_070 Hb_000015_160--Hb_002387_070 Hb_000015_160--Hb_002774_150 Hb_000015_160--Hb_009674_080 Hb_000631_140 Hb_000631_140 Hb_000015_160--Hb_000631_140 Hb_012753_040--Hb_009674_080 Hb_012753_040--Hb_002774_150 Hb_000922_220 Hb_000922_220 Hb_012753_040--Hb_000922_220 Hb_003120_070 Hb_003120_070 Hb_012753_040--Hb_003120_070 Hb_002774_150--Hb_004324_060 Hb_002485_040 Hb_002485_040 Hb_002774_150--Hb_002485_040 Hb_012038_010 Hb_012038_010 Hb_002774_150--Hb_012038_010 Hb_172421_010 Hb_172421_010 Hb_002774_150--Hb_172421_010 Hb_004994_300 Hb_004994_300 Hb_002774_150--Hb_004994_300 Hb_009674_080--Hb_012038_010 Hb_000526_060 Hb_000526_060 Hb_009674_080--Hb_000526_060 Hb_009674_080--Hb_003120_070 Hb_000117_070 Hb_000117_070 Hb_009674_080--Hb_000117_070 Hb_120470_010 Hb_120470_010 Hb_009674_080--Hb_120470_010 Hb_003895_020 Hb_003895_020 Hb_004324_060--Hb_003895_020 Hb_004324_060--Hb_172421_010 Hb_000866_080 Hb_000866_080 Hb_004324_060--Hb_000866_080 Hb_002942_110 Hb_002942_110 Hb_004324_060--Hb_002942_110 Hb_004324_060--Hb_012038_010 Hb_000671_060 Hb_000671_060 Hb_000139_180--Hb_000671_060 Hb_020805_100 Hb_020805_100 Hb_000139_180--Hb_020805_100 Hb_000139_180--Hb_012038_010 Hb_000732_070 Hb_000732_070 Hb_000139_180--Hb_000732_070 Hb_001911_010 Hb_001911_010 Hb_000139_180--Hb_001911_010 Hb_000334_130 Hb_000334_130 Hb_000139_180--Hb_000334_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
30.9919 368.829 110.768 77.3248 142.632 37.4254
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.9788 13.4774 15.3273 33.4194 150.681

CAGE analysis