Hb_000931_010

Information

Type -
Description -
Location Contig931: 25517-31270
Sequence    

Annotation

kegg
ID rcu:RCOM_0464880
description hypothetical protein
nr
ID XP_002528442.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SR23
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0464880 PE=4 SV=1
Gene Ontology
ID GO:0005515
description conserved hypothetical protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000931_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_150379_010 0.1112035163 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647563 [Jatropha curcas]
3 Hb_001080_220 0.1346147452 - - TPA: hypothetical protein ZEAMMB73_966926 [Zea mays]
4 Hb_000703_270 0.1436832714 - - hypothetical protein B456_012G039600 [Gossypium raimondii]
5 Hb_001009_300 0.1479029419 transcription factor TF Family: GNAT PREDICTED: elongator complex protein 3-like [Gossypium raimondii]
6 Hb_004800_120 0.1524560604 - - PREDICTED: maf-like protein DDB_G0281937 isoform X1 [Jatropha curcas]
7 Hb_003623_050 0.1674637249 - - conserved hypothetical protein [Ricinus communis]
8 Hb_020000_010 0.1702000684 - - PREDICTED: KH domain-containing protein At5g56140 [Vitis vinifera]
9 Hb_005615_080 0.1737560644 - - PREDICTED: uncharacterized protein LOC105649609 [Jatropha curcas]
10 Hb_003747_060 0.1737577619 - - PREDICTED: CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2 isoform X2 [Cucumis sativus]
11 Hb_010423_040 0.174575953 - - hypothetical protein JCGZ_17463 [Jatropha curcas]
12 Hb_003333_060 0.1783455048 - - PREDICTED: uncharacterized protein LOC105628461 [Jatropha curcas]
13 Hb_105123_010 0.1788051749 - - PREDICTED: probable protein phosphatase 2C 8 [Jatropha curcas]
14 Hb_000111_420 0.1798269732 - - PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Populus euphratica]
15 Hb_031718_010 0.1822967406 - - -
16 Hb_002221_040 0.1826510442 - - PREDICTED: uncharacterized protein LOC105639851 [Jatropha curcas]
17 Hb_011150_010 0.1829797357 - - PREDICTED: uncharacterized RNA-binding protein C1827.05c [Jatropha curcas]
18 Hb_127552_030 0.1847739118 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
19 Hb_000030_220 0.1852511026 - - PREDICTED: uncharacterized protein LOC105650405 [Jatropha curcas]
20 Hb_155159_030 0.1857272085 - - PREDICTED: putative serine/threonine-protein kinase isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000931_010 Hb_000931_010 Hb_150379_010 Hb_150379_010 Hb_000931_010--Hb_150379_010 Hb_001080_220 Hb_001080_220 Hb_000931_010--Hb_001080_220 Hb_000703_270 Hb_000703_270 Hb_000931_010--Hb_000703_270 Hb_001009_300 Hb_001009_300 Hb_000931_010--Hb_001009_300 Hb_004800_120 Hb_004800_120 Hb_000931_010--Hb_004800_120 Hb_003623_050 Hb_003623_050 Hb_000931_010--Hb_003623_050 Hb_150379_010--Hb_001009_300 Hb_184403_020 Hb_184403_020 Hb_150379_010--Hb_184403_020 Hb_020000_010 Hb_020000_010 Hb_150379_010--Hb_020000_010 Hb_150379_010--Hb_004800_120 Hb_001019_040 Hb_001019_040 Hb_150379_010--Hb_001019_040 Hb_001080_220--Hb_150379_010 Hb_000486_010 Hb_000486_010 Hb_001080_220--Hb_000486_010 Hb_004324_250 Hb_004324_250 Hb_001080_220--Hb_004324_250 Hb_001080_220--Hb_000703_270 Hb_003333_060 Hb_003333_060 Hb_001080_220--Hb_003333_060 Hb_000270_290 Hb_000270_290 Hb_000703_270--Hb_000270_290 Hb_000256_200 Hb_000256_200 Hb_000703_270--Hb_000256_200 Hb_032258_030 Hb_032258_030 Hb_000703_270--Hb_032258_030 Hb_002811_130 Hb_002811_130 Hb_000703_270--Hb_002811_130 Hb_000753_190 Hb_000753_190 Hb_000703_270--Hb_000753_190 Hb_000086_550 Hb_000086_550 Hb_001009_300--Hb_000086_550 Hb_005400_030 Hb_005400_030 Hb_001009_300--Hb_005400_030 Hb_001009_300--Hb_003623_050 Hb_001421_060 Hb_001421_060 Hb_001009_300--Hb_001421_060 Hb_005615_080 Hb_005615_080 Hb_001009_300--Hb_005615_080 Hb_001117_090 Hb_001117_090 Hb_001009_300--Hb_001117_090 Hb_002016_120 Hb_002016_120 Hb_004800_120--Hb_002016_120 Hb_004800_120--Hb_001117_090 Hb_005357_130 Hb_005357_130 Hb_004800_120--Hb_005357_130 Hb_004800_120--Hb_000086_550 Hb_006816_210 Hb_006816_210 Hb_004800_120--Hb_006816_210 Hb_004871_040 Hb_004871_040 Hb_004800_120--Hb_004871_040 Hb_000136_170 Hb_000136_170 Hb_003623_050--Hb_000136_170 Hb_003623_050--Hb_005357_130 Hb_026048_070 Hb_026048_070 Hb_003623_050--Hb_026048_070 Hb_003623_050--Hb_000086_550 Hb_011644_030 Hb_011644_030 Hb_003623_050--Hb_011644_030 Hb_001505_020 Hb_001505_020 Hb_003623_050--Hb_001505_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.448372 0.0939792 0.12521 0.417146 0.808575 1.92528
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.53446 2.17197 0.790727 1.55921 1.36574

CAGE analysis