Hb_004800_120

Information

Type -
Description -
Location Contig4800: 88656-94051
Sequence    

Annotation

kegg
ID rcu:RCOM_0440500
description maf protein, putative
nr
ID XP_012072031.1
description PREDICTED: maf-like protein DDB_G0281937 isoform X1 [Jatropha curcas]
swissprot
ID Q54TC5
description Maf-like protein DDB_G0281937 OS=Dictyostelium discoideum GN=DDB_G0281937 PE=3 SV=1
trembl
ID A0A067KQA0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05173 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004800_120 0.0 - - PREDICTED: maf-like protein DDB_G0281937 isoform X1 [Jatropha curcas]
2 Hb_002016_120 0.0817723091 - - PREDICTED: uncharacterized protein OsI_027940 [Jatropha curcas]
3 Hb_001117_090 0.0837573124 - - PREDICTED: NADPH-dependent pterin aldehyde reductase [Jatropha curcas]
4 Hb_005357_130 0.0891396981 - - hypothetical protein L484_012905 [Morus notabilis]
5 Hb_000086_550 0.0930590427 - - Os02g0814700 [Oryza sativa Japonica Group]
6 Hb_006816_210 0.0934023262 - - PREDICTED: GTP-binding protein SAR1A [Nelumbo nucifera]
7 Hb_004871_040 0.0942630259 - - PREDICTED: tRNA (guanine-N(7)-)-methyltransferase [Jatropha curcas]
8 Hb_001009_300 0.0964931284 transcription factor TF Family: GNAT PREDICTED: elongator complex protein 3-like [Gossypium raimondii]
9 Hb_003581_100 0.099603993 - - PREDICTED: protein TWIN LOV 1 isoform X1 [Jatropha curcas]
10 Hb_003623_050 0.1007345466 - - conserved hypothetical protein [Ricinus communis]
11 Hb_009421_040 0.1011064765 - - PREDICTED: eukaryotic initiation factor 4A [Jatropha curcas]
12 Hb_087749_010 0.1052656437 - - PREDICTED: uncharacterized protein LOC105631194 isoform X1 [Jatropha curcas]
13 Hb_001421_060 0.1055065794 - - PREDICTED: tobamovirus multiplication protein 2B isoform X2 [Jatropha curcas]
14 Hb_024714_010 0.1078560921 - - HSP20-like chaperones superfamily protein isoform 1 [Theobroma cacao]
15 Hb_001789_130 0.1111388705 - - short-chain dehydrogenase Tic32 family protein [Populus trichocarpa]
16 Hb_002260_150 0.1116960661 - - PREDICTED: uncharacterized protein LOC105647187 isoform X2 [Jatropha curcas]
17 Hb_033153_060 0.1129333147 - - Transcription elongation factor, putative [Ricinus communis]
18 Hb_017413_010 0.1134223822 - - -
19 Hb_008554_070 0.1144761138 - - PREDICTED: peroxisome biogenesis protein 3-2 isoform X2 [Jatropha curcas]
20 Hb_006541_010 0.1146521422 - - PREDICTED: uncharacterized protein LOC105637261 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004800_120 Hb_004800_120 Hb_002016_120 Hb_002016_120 Hb_004800_120--Hb_002016_120 Hb_001117_090 Hb_001117_090 Hb_004800_120--Hb_001117_090 Hb_005357_130 Hb_005357_130 Hb_004800_120--Hb_005357_130 Hb_000086_550 Hb_000086_550 Hb_004800_120--Hb_000086_550 Hb_006816_210 Hb_006816_210 Hb_004800_120--Hb_006816_210 Hb_004871_040 Hb_004871_040 Hb_004800_120--Hb_004871_040 Hb_008554_070 Hb_008554_070 Hb_002016_120--Hb_008554_070 Hb_024714_010 Hb_024714_010 Hb_002016_120--Hb_024714_010 Hb_006541_010 Hb_006541_010 Hb_002016_120--Hb_006541_010 Hb_001235_030 Hb_001235_030 Hb_002016_120--Hb_001235_030 Hb_033153_060 Hb_033153_060 Hb_002016_120--Hb_033153_060 Hb_000926_300 Hb_000926_300 Hb_001117_090--Hb_000926_300 Hb_003599_040 Hb_003599_040 Hb_001117_090--Hb_003599_040 Hb_000877_020 Hb_000877_020 Hb_001117_090--Hb_000877_020 Hb_000340_140 Hb_000340_140 Hb_001117_090--Hb_000340_140 Hb_009421_040 Hb_009421_040 Hb_001117_090--Hb_009421_040 Hb_001246_060 Hb_001246_060 Hb_001117_090--Hb_001246_060 Hb_005357_130--Hb_000086_550 Hb_005357_130--Hb_009421_040 Hb_003623_050 Hb_003623_050 Hb_005357_130--Hb_003623_050 Hb_012022_120 Hb_012022_120 Hb_005357_130--Hb_012022_120 Hb_005357_130--Hb_006541_010 Hb_005357_130--Hb_006816_210 Hb_000086_550--Hb_000340_140 Hb_004032_100 Hb_004032_100 Hb_000086_550--Hb_004032_100 Hb_000364_020 Hb_000364_020 Hb_000086_550--Hb_000364_020 Hb_006816_530 Hb_006816_530 Hb_000086_550--Hb_006816_530 Hb_011161_050 Hb_011161_050 Hb_000086_550--Hb_011161_050 Hb_015807_040 Hb_015807_040 Hb_006816_210--Hb_015807_040 Hb_017413_010 Hb_017413_010 Hb_006816_210--Hb_017413_010 Hb_000331_450 Hb_000331_450 Hb_006816_210--Hb_000331_450 Hb_006816_210--Hb_000086_550 Hb_006846_060 Hb_006846_060 Hb_006816_210--Hb_006846_060 Hb_004871_040--Hb_001117_090 Hb_002798_020 Hb_002798_020 Hb_004871_040--Hb_002798_020 Hb_004871_040--Hb_009421_040 Hb_003581_100 Hb_003581_100 Hb_004871_040--Hb_003581_100 Hb_087749_010 Hb_087749_010 Hb_004871_040--Hb_087749_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.866291 0.409276 0.538821 1.23713 1.49492 2.44284
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.87964 4.0472 1.37184 1.20786 1.67773

CAGE analysis