Hb_012022_120

Information

Type -
Description -
Location Contig12022: 176693-180069
Sequence    

Annotation

kegg
ID rcu:RCOM_0643900
description hypothetical protein
nr
ID XP_012087860.1
description PREDICTED: protein N-methyltransferase NNT1 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JWR4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25019 PE=4 SV=1
Gene Ontology
ID GO:0008168
description protein n-methyltransferase nnt1 isoform x4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06279: 176705-180069
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012022_120 0.0 - - PREDICTED: protein N-methyltransferase NNT1 isoform X2 [Jatropha curcas]
2 Hb_000505_140 0.0600090583 - - PREDICTED: actin-related protein 2/3 complex subunit 3 [Populus euphratica]
3 Hb_002830_020 0.0613092685 - - PREDICTED: outer envelope pore protein 16-3, chloroplastic/mitochondrial [Jatropha curcas]
4 Hb_032202_090 0.0682670854 - - PREDICTED: ubiquitin-related modifier 1 homolog 2 [Jatropha curcas]
5 Hb_000000_170 0.068954333 - - defender against cell death, putative [Ricinus communis]
6 Hb_000995_040 0.0695186213 - - conserved hypothetical protein [Ricinus communis]
7 Hb_005278_020 0.0716992107 - - PREDICTED: sorcin-like [Jatropha curcas]
8 Hb_000699_160 0.0736279964 - - PREDICTED: C-Myc-binding protein homolog [Jatropha curcas]
9 Hb_001016_030 0.0761605069 - - PREDICTED: uncharacterized protein LOC105636529 isoform X2 [Jatropha curcas]
10 Hb_000086_550 0.0799138776 - - Os02g0814700 [Oryza sativa Japonica Group]
11 Hb_002207_110 0.0799227525 - - -
12 Hb_000484_020 0.0816885156 - - hypothetical protein CISIN_1g030884mg [Citrus sinensis]
13 Hb_002864_050 0.0817264092 - - PREDICTED: ras-related protein RABH1b [Jatropha curcas]
14 Hb_005357_130 0.083098245 - - hypothetical protein L484_012905 [Morus notabilis]
15 Hb_000283_110 0.0845346222 - - PREDICTED: probable prefoldin subunit 4 isoform X2 [Jatropha curcas]
16 Hb_182305_020 0.0846969662 - - PREDICTED: actin-related protein 2/3 complex subunit 3 [Jatropha curcas]
17 Hb_000085_320 0.0868329578 - - Uncharacterized protein TCM_030749 [Theobroma cacao]
18 Hb_002431_050 0.0878184726 - - PREDICTED: probable protein phosphatase 2C 11 [Jatropha curcas]
19 Hb_001505_020 0.0905711359 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Jatropha curcas]
20 Hb_001842_040 0.090666134 - - PREDICTED: uncharacterized protein LOC100800807 isoform X2 [Glycine max]

Gene co-expression network

sample Hb_012022_120 Hb_012022_120 Hb_000505_140 Hb_000505_140 Hb_012022_120--Hb_000505_140 Hb_002830_020 Hb_002830_020 Hb_012022_120--Hb_002830_020 Hb_032202_090 Hb_032202_090 Hb_012022_120--Hb_032202_090 Hb_000000_170 Hb_000000_170 Hb_012022_120--Hb_000000_170 Hb_000995_040 Hb_000995_040 Hb_012022_120--Hb_000995_040 Hb_005278_020 Hb_005278_020 Hb_012022_120--Hb_005278_020 Hb_000505_140--Hb_000000_170 Hb_000505_140--Hb_032202_090 Hb_004502_020 Hb_004502_020 Hb_000505_140--Hb_004502_020 Hb_000086_550 Hb_000086_550 Hb_000505_140--Hb_000086_550 Hb_000926_300 Hb_000926_300 Hb_000505_140--Hb_000926_300 Hb_002431_050 Hb_002431_050 Hb_002830_020--Hb_002431_050 Hb_002864_050 Hb_002864_050 Hb_002830_020--Hb_002864_050 Hb_000201_120 Hb_000201_120 Hb_002830_020--Hb_000201_120 Hb_094608_010 Hb_094608_010 Hb_002830_020--Hb_094608_010 Hb_003581_150 Hb_003581_150 Hb_002830_020--Hb_003581_150 Hb_000317_340 Hb_000317_340 Hb_032202_090--Hb_000317_340 Hb_000545_150 Hb_000545_150 Hb_032202_090--Hb_000545_150 Hb_012573_070 Hb_012573_070 Hb_032202_090--Hb_012573_070 Hb_032202_090--Hb_000926_300 Hb_128048_010 Hb_128048_010 Hb_000000_170--Hb_128048_010 Hb_001184_090 Hb_001184_090 Hb_000000_170--Hb_001184_090 Hb_000000_170--Hb_000926_300 Hb_002900_160 Hb_002900_160 Hb_000000_170--Hb_002900_160 Hb_000995_040--Hb_005278_020 Hb_000484_020 Hb_000484_020 Hb_000995_040--Hb_000484_020 Hb_000995_040--Hb_000086_550 Hb_000995_040--Hb_032202_090 Hb_000995_040--Hb_000505_140 Hb_026314_020 Hb_026314_020 Hb_005278_020--Hb_026314_020 Hb_017413_010 Hb_017413_010 Hb_005278_020--Hb_017413_010 Hb_001016_030 Hb_001016_030 Hb_005278_020--Hb_001016_030 Hb_001842_040 Hb_001842_040 Hb_005278_020--Hb_001842_040 Hb_004784_020 Hb_004784_020 Hb_005278_020--Hb_004784_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.72047 1.87268 6.26748 10.7406 10.109 13.2162
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
19.8318 28.3386 11.6445 5.7144 4.68892

CAGE analysis