Hb_094608_010

Information

Type -
Description -
Location Contig94608: 312-2900
Sequence    

Annotation

kegg
ID rcu:RCOM_0836450
description hypothetical protein
nr
ID XP_012067648.1
description PREDICTED: uncharacterized protein LOC105630444 isoform X3 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9S8X0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0836450 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63272: 980-1825
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094608_010 0.0 - - PREDICTED: uncharacterized protein LOC105630444 isoform X3 [Jatropha curcas]
2 Hb_002830_020 0.0671385232 - - PREDICTED: outer envelope pore protein 16-3, chloroplastic/mitochondrial [Jatropha curcas]
3 Hb_007576_170 0.074284808 - - conserved hypothetical protein [Ricinus communis]
4 Hb_007012_060 0.0743886589 - - PREDICTED: UPF0183 protein At3g51130 isoform X2 [Jatropha curcas]
5 Hb_005181_030 0.0763713936 - - PREDICTED: huntingtin-interacting protein K [Jatropha curcas]
6 Hb_000877_020 0.0765599908 - - PREDICTED: F-box/LRR-repeat protein 4 [Jatropha curcas]
7 Hb_101705_030 0.0831314831 - - hypothetical protein CICLE_v10032980mg [Citrus clementina]
8 Hb_006541_010 0.0846597652 - - PREDICTED: uncharacterized protein LOC105637261 isoform X1 [Jatropha curcas]
9 Hb_002864_050 0.0896745737 - - PREDICTED: ras-related protein RABH1b [Jatropha curcas]
10 Hb_003077_040 0.0898003451 - - PREDICTED: probable E3 ubiquitin-protein ligase HIP1 [Jatropha curcas]
11 Hb_012022_120 0.0929434627 - - PREDICTED: protein N-methyltransferase NNT1 isoform X2 [Jatropha curcas]
12 Hb_143766_010 0.0931852583 - - PREDICTED: uncharacterized protein LOC105637787 [Jatropha curcas]
13 Hb_000680_140 0.0940195643 - - PREDICTED: uncharacterized protein LOC105631472 isoform X1 [Jatropha curcas]
14 Hb_001396_100 0.0946943176 - - DNA binding protein, putative [Ricinus communis]
15 Hb_015807_040 0.0951228884 - - PREDICTED: polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM [Jatropha curcas]
16 Hb_004459_040 0.095281501 - - PREDICTED: uncharacterized protein LOC105649649 [Jatropha curcas]
17 Hb_001105_030 0.0953386134 - - PREDICTED: probable caffeoyl-CoA O-methyltransferase At4g26220 [Jatropha curcas]
18 Hb_001484_070 0.0954141993 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000102_020 0.0955102897 - - hypothetical protein JCGZ_11933 [Jatropha curcas]
20 Hb_001616_040 0.0955585395 - - PREDICTED: uncharacterized protein LOC105644362 [Jatropha curcas]

Gene co-expression network

sample Hb_094608_010 Hb_094608_010 Hb_002830_020 Hb_002830_020 Hb_094608_010--Hb_002830_020 Hb_007576_170 Hb_007576_170 Hb_094608_010--Hb_007576_170 Hb_007012_060 Hb_007012_060 Hb_094608_010--Hb_007012_060 Hb_005181_030 Hb_005181_030 Hb_094608_010--Hb_005181_030 Hb_000877_020 Hb_000877_020 Hb_094608_010--Hb_000877_020 Hb_101705_030 Hb_101705_030 Hb_094608_010--Hb_101705_030 Hb_002431_050 Hb_002431_050 Hb_002830_020--Hb_002431_050 Hb_012022_120 Hb_012022_120 Hb_002830_020--Hb_012022_120 Hb_002864_050 Hb_002864_050 Hb_002830_020--Hb_002864_050 Hb_000201_120 Hb_000201_120 Hb_002830_020--Hb_000201_120 Hb_003581_150 Hb_003581_150 Hb_002830_020--Hb_003581_150 Hb_004459_040 Hb_004459_040 Hb_007576_170--Hb_004459_040 Hb_000431_070 Hb_000431_070 Hb_007576_170--Hb_000431_070 Hb_002798_020 Hb_002798_020 Hb_007576_170--Hb_002798_020 Hb_033153_060 Hb_033153_060 Hb_007576_170--Hb_033153_060 Hb_006541_010 Hb_006541_010 Hb_007576_170--Hb_006541_010 Hb_017225_020 Hb_017225_020 Hb_007576_170--Hb_017225_020 Hb_143766_010 Hb_143766_010 Hb_007012_060--Hb_143766_010 Hb_007441_040 Hb_007441_040 Hb_007012_060--Hb_007441_040 Hb_000102_020 Hb_000102_020 Hb_007012_060--Hb_000102_020 Hb_007012_060--Hb_005181_030 Hb_007012_060--Hb_002830_020 Hb_001279_360 Hb_001279_360 Hb_005181_030--Hb_001279_360 Hb_005181_030--Hb_004459_040 Hb_002687_170 Hb_002687_170 Hb_005181_030--Hb_002687_170 Hb_004157_030 Hb_004157_030 Hb_005181_030--Hb_004157_030 Hb_001085_120 Hb_001085_120 Hb_005181_030--Hb_001085_120 Hb_001117_090 Hb_001117_090 Hb_000877_020--Hb_001117_090 Hb_000483_410 Hb_000483_410 Hb_000877_020--Hb_000483_410 Hb_024714_010 Hb_024714_010 Hb_000877_020--Hb_024714_010 Hb_012725_050 Hb_012725_050 Hb_000877_020--Hb_012725_050 Hb_002214_040 Hb_002214_040 Hb_000877_020--Hb_002214_040 Hb_002874_190 Hb_002874_190 Hb_101705_030--Hb_002874_190 Hb_006117_070 Hb_006117_070 Hb_101705_030--Hb_006117_070 Hb_101705_030--Hb_002864_050 Hb_158467_010 Hb_158467_010 Hb_101705_030--Hb_158467_010 Hb_001140_060 Hb_001140_060 Hb_101705_030--Hb_001140_060 Hb_001604_080 Hb_001604_080 Hb_101705_030--Hb_001604_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.71295 0.627287 3.16156 2.40388 2.65523 4.2827
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.75955 8.04611 5.05326 2.34688 2.18936

CAGE analysis