Hb_000866_310

Information

Type -
Description -
Location Contig866: 208815-212058
Sequence    

Annotation

kegg
ID rcu:RCOM_1615090
description hypothetical protein
nr
ID XP_012083412.1
description PREDICTED: neural Wiskott-Aldrich syndrome protein [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JXM2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14413 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60968: 208923-212078
cDNA
(Sanger)
(ID:Location)		 008_D07r.ab1: 206878-208674 , 014_D09r.ab1: 206878-208674

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000866_310 0.0 - - PREDICTED: neural Wiskott-Aldrich syndrome protein [Jatropha curcas]
2 Hb_007441_020 0.0625589318 - - Rab6 [Hevea brasiliensis]
3 Hb_000789_320 0.0644537456 transcription factor TF Family: LUG PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
4 Hb_004994_010 0.0738293497 - - PREDICTED: COP9 signalosome complex subunit 1 [Jatropha curcas]
5 Hb_000260_680 0.0744136459 - - PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2-A [Jatropha curcas]
6 Hb_000416_110 0.0744192262 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X2 [Jatropha curcas]
7 Hb_002445_100 0.0757218304 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 5 isoform X2 [Jatropha curcas]
8 Hb_001153_210 0.0770560075 - - PREDICTED: uncharacterized protein LOC105645887 isoform X1 [Jatropha curcas]
9 Hb_171900_090 0.0770897062 - - conserved hypothetical protein [Ricinus communis]
10 Hb_106552_020 0.0782496649 - - PREDICTED: serine/arginine-rich splicing factor RS2Z33 isoform X1 [Jatropha curcas]
11 Hb_154580_010 0.0792562059 - - hypothetical protein PRUPE_ppa002109mg [Prunus persica]
12 Hb_001186_090 0.081516203 - - PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 2 [Jatropha curcas]
13 Hb_000339_040 0.0819589049 - - PREDICTED: SAP30-binding protein isoform X2 [Jatropha curcas]
14 Hb_002067_030 0.086622146 - - PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X2 [Jatropha curcas]
15 Hb_000359_040 0.0887972816 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002876_230 0.0894460287 - - PREDICTED: uncharacterized protein LOC105633933 [Jatropha curcas]
17 Hb_000390_230 0.0897922282 - - PREDICTED: transducin beta-like protein 3 [Jatropha curcas]
18 Hb_002986_100 0.0898993934 - - PREDICTED: uncharacterized protein LOC105639686 [Jatropha curcas]
19 Hb_002909_040 0.0903438641 desease resistance Gene Name: AAA PREDICTED: 26S protease regulatory subunit 6B homolog [Jatropha curcas]
20 Hb_002119_080 0.0907525249 - - PREDICTED: 54S ribosomal protein L24, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_000866_310 Hb_000866_310 Hb_007441_020 Hb_007441_020 Hb_000866_310--Hb_007441_020 Hb_000789_320 Hb_000789_320 Hb_000866_310--Hb_000789_320 Hb_004994_010 Hb_004994_010 Hb_000866_310--Hb_004994_010 Hb_000260_680 Hb_000260_680 Hb_000866_310--Hb_000260_680 Hb_000416_110 Hb_000416_110 Hb_000866_310--Hb_000416_110 Hb_002445_100 Hb_002445_100 Hb_000866_310--Hb_002445_100 Hb_106552_020 Hb_106552_020 Hb_007441_020--Hb_106552_020 Hb_000035_110 Hb_000035_110 Hb_007441_020--Hb_000035_110 Hb_008568_020 Hb_008568_020 Hb_007441_020--Hb_008568_020 Hb_000005_220 Hb_000005_220 Hb_007441_020--Hb_000005_220 Hb_000239_060 Hb_000239_060 Hb_007441_020--Hb_000239_060 Hb_171900_090 Hb_171900_090 Hb_000789_320--Hb_171900_090 Hb_000339_040 Hb_000339_040 Hb_000789_320--Hb_000339_040 Hb_001623_270 Hb_001623_270 Hb_000789_320--Hb_001623_270 Hb_001025_090 Hb_001025_090 Hb_000789_320--Hb_001025_090 Hb_001153_210 Hb_001153_210 Hb_000789_320--Hb_001153_210 Hb_003861_050 Hb_003861_050 Hb_004994_010--Hb_003861_050 Hb_000390_230 Hb_000390_230 Hb_004994_010--Hb_000390_230 Hb_001456_060 Hb_001456_060 Hb_004994_010--Hb_001456_060 Hb_000359_040 Hb_000359_040 Hb_004994_010--Hb_000359_040 Hb_010407_050 Hb_010407_050 Hb_004994_010--Hb_010407_050 Hb_004994_010--Hb_000339_040 Hb_001776_060 Hb_001776_060 Hb_000260_680--Hb_001776_060 Hb_000331_110 Hb_000331_110 Hb_000260_680--Hb_000331_110 Hb_002217_110 Hb_002217_110 Hb_000260_680--Hb_002217_110 Hb_079526_030 Hb_079526_030 Hb_000260_680--Hb_079526_030 Hb_000260_680--Hb_001153_210 Hb_005779_010 Hb_005779_010 Hb_000260_680--Hb_005779_010 Hb_000416_110--Hb_002445_100 Hb_183433_010 Hb_183433_010 Hb_000416_110--Hb_183433_010 Hb_000416_110--Hb_001153_210 Hb_000416_110--Hb_000005_220 Hb_000416_110--Hb_000789_320 Hb_002445_100--Hb_005779_010 Hb_002445_100--Hb_000005_220 Hb_002445_100--Hb_000339_040 Hb_002445_100--Hb_106552_020 Hb_002889_010 Hb_002889_010 Hb_002445_100--Hb_002889_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.6242 18.869 35.6938 15.4393 15.2042 21.2703
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.6449 18.1912 10.3921 18.9149 12.5674

CAGE analysis