Hb_000710_030

Information

Type -
Description -
Location Contig710: 18127-18627
Sequence    

Annotation

kegg
ID rcu:RCOM_1314880
description hypothetical protein
nr
ID XP_012066443.1
description PREDICTED: uncharacterized protein LOC105629456 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LDW9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23625 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000710_030 0.0 - - PREDICTED: uncharacterized protein LOC105629456 [Jatropha curcas]
2 Hb_001766_130 0.1073698454 - - zinc finger protein, putative [Ricinus communis]
3 Hb_000928_280 0.1107062438 - - hypothetical protein VITISV_005300 [Vitis vinifera]
4 Hb_003893_130 0.1122214061 - - metal ion binding protein, putative [Ricinus communis]
5 Hb_012098_160 0.1153548411 - - PREDICTED: pathogenesis-related protein 5-like [Jatropha curcas]
6 Hb_011909_050 0.1221557914 - - PREDICTED: calcium-binding protein PBP1 [Jatropha curcas]
7 Hb_008895_020 0.123636391 - - Phospho-N-acetylmuramoyl-pentapeptide-transferase, putative [Theobroma cacao]
8 Hb_001486_280 0.1238235361 - - hypothetical protein RCOM_1321910 [Ricinus communis]
9 Hb_006651_030 0.124042839 - - unnamed protein product [Homo sapiens]
10 Hb_001289_010 0.1265872446 - - PREDICTED: chaperone protein ClpB4, mitochondrial [Vitis vinifera]
11 Hb_005762_010 0.129494169 - - PREDICTED: protein CHUP1, chloroplastic-like [Populus euphratica]
12 Hb_017383_010 0.1316186907 - - PREDICTED: uncharacterized protein LOC105628176 [Jatropha curcas]
13 Hb_000904_120 0.1316843057 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001100_070 0.1329664739 - - PREDICTED: ferredoxin--nitrite reductase, chloroplastic isoform X1 [Jatropha curcas]
15 Hb_004220_010 0.1337027828 - - PREDICTED: uncharacterized protein LOC105642366 [Jatropha curcas]
16 Hb_000617_330 0.1339562491 - - PREDICTED: uncharacterized protein LOC105647507 [Jatropha curcas]
17 Hb_002485_010 0.1340351339 - - PREDICTED: extensin [Jatropha curcas]
18 Hb_012670_090 0.135041758 - - GDSL-motif lipase/hydrolase family protein [Populus trichocarpa]
19 Hb_000680_170 0.1354578465 - - hypothetical protein JCGZ_24789 [Jatropha curcas]
20 Hb_000718_060 0.1356027142 transcription factor TF Family: MYB DNA binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000710_030 Hb_000710_030 Hb_001766_130 Hb_001766_130 Hb_000710_030--Hb_001766_130 Hb_000928_280 Hb_000928_280 Hb_000710_030--Hb_000928_280 Hb_003893_130 Hb_003893_130 Hb_000710_030--Hb_003893_130 Hb_012098_160 Hb_012098_160 Hb_000710_030--Hb_012098_160 Hb_011909_050 Hb_011909_050 Hb_000710_030--Hb_011909_050 Hb_008895_020 Hb_008895_020 Hb_000710_030--Hb_008895_020 Hb_096027_010 Hb_096027_010 Hb_001766_130--Hb_096027_010 Hb_005762_010 Hb_005762_010 Hb_001766_130--Hb_005762_010 Hb_003339_010 Hb_003339_010 Hb_001766_130--Hb_003339_010 Hb_185726_010 Hb_185726_010 Hb_001766_130--Hb_185726_010 Hb_012670_090 Hb_012670_090 Hb_001766_130--Hb_012670_090 Hb_000230_300 Hb_000230_300 Hb_001766_130--Hb_000230_300 Hb_161103_010 Hb_161103_010 Hb_000928_280--Hb_161103_010 Hb_000928_280--Hb_008895_020 Hb_008406_060 Hb_008406_060 Hb_000928_280--Hb_008406_060 Hb_006651_030 Hb_006651_030 Hb_000928_280--Hb_006651_030 Hb_001477_060 Hb_001477_060 Hb_000928_280--Hb_001477_060 Hb_000620_040 Hb_000620_040 Hb_003893_130--Hb_000620_040 Hb_001541_210 Hb_001541_210 Hb_003893_130--Hb_001541_210 Hb_003032_030 Hb_003032_030 Hb_003893_130--Hb_003032_030 Hb_005741_030 Hb_005741_030 Hb_003893_130--Hb_005741_030 Hb_000193_180 Hb_000193_180 Hb_003893_130--Hb_000193_180 Hb_005675_070 Hb_005675_070 Hb_003893_130--Hb_005675_070 Hb_000270_380 Hb_000270_380 Hb_012098_160--Hb_000270_380 Hb_007163_100 Hb_007163_100 Hb_012098_160--Hb_007163_100 Hb_009023_010 Hb_009023_010 Hb_012098_160--Hb_009023_010 Hb_001486_280 Hb_001486_280 Hb_012098_160--Hb_001486_280 Hb_000904_120 Hb_000904_120 Hb_012098_160--Hb_000904_120 Hb_015561_010 Hb_015561_010 Hb_012098_160--Hb_015561_010 Hb_009393_090 Hb_009393_090 Hb_011909_050--Hb_009393_090 Hb_000718_060 Hb_000718_060 Hb_011909_050--Hb_000718_060 Hb_011909_050--Hb_161103_010 Hb_011909_050--Hb_006651_030 Hb_011909_050--Hb_008406_060 Hb_011909_050--Hb_001766_130 Hb_001638_340 Hb_001638_340 Hb_008895_020--Hb_001638_340 Hb_008895_020--Hb_006651_030 Hb_029977_030 Hb_029977_030 Hb_008895_020--Hb_029977_030 Hb_124677_090 Hb_124677_090 Hb_008895_020--Hb_124677_090 Hb_008895_020--Hb_001477_060 Hb_059275_010 Hb_059275_010 Hb_008895_020--Hb_059275_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.171437 1.81171 4.88607 6.67905 0.0576261 0.153899
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 5.30707

CAGE analysis