Hb_000684_070

Information

Type -
Description -
Location Contig684: 130306-131569
Sequence    

Annotation

kegg
ID pop:POPTR_0006s13180g
description hypothetical protein
nr
ID XP_012082321.1
description PREDICTED: uncharacterized protein LOC105642198 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JYX2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16486 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000684_070 0.0 - - PREDICTED: uncharacterized protein LOC105642198 isoform X1 [Jatropha curcas]
2 Hb_001158_130 0.0618973562 - - PREDICTED: protein TAPETUM DETERMINANT 1-like [Jatropha curcas]
3 Hb_002119_100 0.0749888298 - - cytochrome B561, putative [Ricinus communis]
4 Hb_001199_110 0.0787560551 - - PREDICTED: uncharacterized protein ycf36 isoform X1 [Jatropha curcas]
5 Hb_007483_090 0.0791050181 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000103_200 0.0842042243 - - calmodulin binding protein, putative [Ricinus communis]
7 Hb_000599_150 0.084371553 - - PREDICTED: probable arabinose 5-phosphate isomerase [Jatropha curcas]
8 Hb_006615_090 0.0844384023 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
9 Hb_003723_050 0.0851072751 - - conserved hypothetical protein [Ricinus communis]
10 Hb_189208_070 0.0854917263 - - 10-deacetylbaccatin III 10-O-acetyltransferase, putative [Ricinus communis]
11 Hb_000230_300 0.0862980586 - - PREDICTED: S-adenosylmethionine decarboxylase proenzyme 4 [Jatropha curcas]
12 Hb_000928_030 0.0867014753 transcription factor TF Family: bZIP PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5 [Jatropha curcas]
13 Hb_052530_020 0.0880550836 - - cytochrome B5 isoform 1, putative [Ricinus communis]
14 Hb_000329_780 0.0933934777 - - hypothetical protein POPTR_0403s00200g [Populus trichocarpa]
15 Hb_005762_010 0.0947737918 - - PREDICTED: protein CHUP1, chloroplastic-like [Populus euphratica]
16 Hb_005337_100 0.0974275684 - - PREDICTED: uncharacterized protein LOC105629349 [Jatropha curcas]
17 Hb_006816_380 0.0986117035 - - PREDICTED: kinesin-4-like [Jatropha curcas]
18 Hb_000881_020 0.0995170734 - - hypothetical protein MIMGU_mgv1a022110mg, partial [Erythranthe guttata]
19 Hb_000915_170 0.0998037325 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 isoform X1 [Vitis vinifera]
20 Hb_004032_280 0.1028380112 - - PREDICTED: uncharacterized protein LOC105635149 [Jatropha curcas]

Gene co-expression network

sample Hb_000684_070 Hb_000684_070 Hb_001158_130 Hb_001158_130 Hb_000684_070--Hb_001158_130 Hb_002119_100 Hb_002119_100 Hb_000684_070--Hb_002119_100 Hb_001199_110 Hb_001199_110 Hb_000684_070--Hb_001199_110 Hb_007483_090 Hb_007483_090 Hb_000684_070--Hb_007483_090 Hb_000103_200 Hb_000103_200 Hb_000684_070--Hb_000103_200 Hb_000599_150 Hb_000599_150 Hb_000684_070--Hb_000599_150 Hb_189208_070 Hb_189208_070 Hb_001158_130--Hb_189208_070 Hb_012098_100 Hb_012098_100 Hb_001158_130--Hb_012098_100 Hb_000881_020 Hb_000881_020 Hb_001158_130--Hb_000881_020 Hb_000042_280 Hb_000042_280 Hb_001158_130--Hb_000042_280 Hb_001158_130--Hb_001199_110 Hb_002119_100--Hb_007483_090 Hb_000329_780 Hb_000329_780 Hb_002119_100--Hb_000329_780 Hb_002062_010 Hb_002062_010 Hb_002119_100--Hb_002062_010 Hb_003417_050 Hb_003417_050 Hb_002119_100--Hb_003417_050 Hb_002740_050 Hb_002740_050 Hb_002119_100--Hb_002740_050 Hb_015561_010 Hb_015561_010 Hb_002119_100--Hb_015561_010 Hb_006615_090 Hb_006615_090 Hb_001199_110--Hb_006615_090 Hb_002477_190 Hb_002477_190 Hb_001199_110--Hb_002477_190 Hb_000803_080 Hb_000803_080 Hb_001199_110--Hb_000803_080 Hb_001141_100 Hb_001141_100 Hb_001199_110--Hb_001141_100 Hb_147028_010 Hb_147028_010 Hb_001199_110--Hb_147028_010 Hb_007483_090--Hb_003417_050 Hb_007483_090--Hb_000329_780 Hb_007483_090--Hb_002062_010 Hb_128986_010 Hb_128986_010 Hb_007483_090--Hb_128986_010 Hb_007483_090--Hb_015561_010 Hb_004137_040 Hb_004137_040 Hb_000103_200--Hb_004137_040 Hb_000230_300 Hb_000230_300 Hb_000103_200--Hb_000230_300 Hb_002221_060 Hb_002221_060 Hb_000103_200--Hb_002221_060 Hb_005762_010 Hb_005762_010 Hb_000103_200--Hb_005762_010 Hb_000928_030 Hb_000928_030 Hb_000103_200--Hb_000928_030 Hb_000028_190 Hb_000028_190 Hb_000103_200--Hb_000028_190 Hb_004032_280 Hb_004032_280 Hb_000599_150--Hb_004032_280 Hb_000031_180 Hb_000031_180 Hb_000599_150--Hb_000031_180 Hb_052530_020 Hb_052530_020 Hb_000599_150--Hb_052530_020 Hb_000599_150--Hb_000329_780 Hb_002572_040 Hb_002572_040 Hb_000599_150--Hb_002572_040 Hb_000599_150--Hb_007483_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0181568 1.58945 12.8758 17.7168 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0414803 0 0 0 18.3481

CAGE analysis