Hb_189208_070

Information

Type -
Description -
Location Contig189208: 40665-42136
Sequence    

Annotation

kegg
ID rcu:RCOM_1343600
description 10-deacetylbaccatin III 10-O-acetyltransferase, putative (EC:2.3.1.167)
nr
ID XP_002515188.1
description 10-deacetylbaccatin III 10-O-acetyltransferase, putative [Ricinus communis]
swissprot
ID Q8LL69
description 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase OS=Taxus canadensis GN=TAX10 PE=1 SV=1
trembl
ID B9RN49
description 10-deacetylbaccatin III 10-O-acetyltransferase, putative OS=Ricinus communis GN=RCOM_1343600 PE=4 SV=1
Gene Ontology
ID GO:0005737
description 3 -n-debenzoyl-2 -deoxytaxol n-benzoyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18790: 40641-42413 , PASA_asmbl_18791: 40833-41531
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_189208_070 0.0 - - 10-deacetylbaccatin III 10-O-acetyltransferase, putative [Ricinus communis]
2 Hb_001158_130 0.0535013181 - - PREDICTED: protein TAPETUM DETERMINANT 1-like [Jatropha curcas]
3 Hb_012098_100 0.065809295 - - zinc finger protein, putative [Ricinus communis]
4 Hb_000538_090 0.0704020194 transcription factor TF Family: NAC hypothetical protein RCOM_1603380 [Ricinus communis]
5 Hb_000881_020 0.0766443818 - - hypothetical protein MIMGU_mgv1a022110mg, partial [Erythranthe guttata]
6 Hb_009588_010 0.0784803169 - - sigma factor sigb regulation protein rsbq, putative [Ricinus communis]
7 Hb_012395_240 0.0803475795 - - PREDICTED: uncharacterized protein LOC105638421 isoform X2 [Jatropha curcas]
8 Hb_000928_030 0.0819643088 transcription factor TF Family: bZIP PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5 [Jatropha curcas]
9 Hb_000042_280 0.0831665344 - - chlorophyll A/B binding protein, putative [Ricinus communis]
10 Hb_004880_020 0.0845957878 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 [Jatropha curcas]
11 Hb_001426_020 0.0853589603 - - hypothetical protein CICLE_v10033594mg, partial [Citrus clementina]
12 Hb_000684_070 0.0854917263 - - PREDICTED: uncharacterized protein LOC105642198 isoform X1 [Jatropha curcas]
13 Hb_143629_180 0.0865208248 transcription factor TF Family: MYB myb family transcription factor family protein [Populus trichocarpa]
14 Hb_000418_130 0.0879801798 - - PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Jatropha curcas]
15 Hb_126714_010 0.089772567 - - hypothetical protein CISIN_1g041016mg, partial [Citrus sinensis]
16 Hb_000487_080 0.0902720572 - - PREDICTED: probable potassium transporter 13 [Jatropha curcas]
17 Hb_001488_230 0.0903582289 - - PREDICTED: serine carboxypeptidase-like 25 isoform X2 [Populus euphratica]
18 Hb_001642_020 0.0908471707 - - PREDICTED: probable cinnamyl alcohol dehydrogenase 9 [Jatropha curcas]
19 Hb_000058_180 0.0913531701 - - PREDICTED: protein ECERIFERUM 3 [Jatropha curcas]
20 Hb_006588_140 0.091783722 - - PREDICTED: uncharacterized protein LOC104906772 [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_189208_070 Hb_189208_070 Hb_001158_130 Hb_001158_130 Hb_189208_070--Hb_001158_130 Hb_012098_100 Hb_012098_100 Hb_189208_070--Hb_012098_100 Hb_000538_090 Hb_000538_090 Hb_189208_070--Hb_000538_090 Hb_000881_020 Hb_000881_020 Hb_189208_070--Hb_000881_020 Hb_009588_010 Hb_009588_010 Hb_189208_070--Hb_009588_010 Hb_012395_240 Hb_012395_240 Hb_189208_070--Hb_012395_240 Hb_001158_130--Hb_012098_100 Hb_001158_130--Hb_000881_020 Hb_000684_070 Hb_000684_070 Hb_001158_130--Hb_000684_070 Hb_000042_280 Hb_000042_280 Hb_001158_130--Hb_000042_280 Hb_001199_110 Hb_001199_110 Hb_001158_130--Hb_001199_110 Hb_012098_100--Hb_000881_020 Hb_012098_100--Hb_000042_280 Hb_001488_230 Hb_001488_230 Hb_012098_100--Hb_001488_230 Hb_012098_100--Hb_009588_010 Hb_000000_390 Hb_000000_390 Hb_000538_090--Hb_000000_390 Hb_002078_330 Hb_002078_330 Hb_000538_090--Hb_002078_330 Hb_000058_180 Hb_000058_180 Hb_000538_090--Hb_000058_180 Hb_000538_090--Hb_012395_240 Hb_008147_020 Hb_008147_020 Hb_000538_090--Hb_008147_020 Hb_143629_180 Hb_143629_180 Hb_000538_090--Hb_143629_180 Hb_000881_020--Hb_000042_280 Hb_004223_150 Hb_004223_150 Hb_000881_020--Hb_004223_150 Hb_004635_120 Hb_004635_120 Hb_000881_020--Hb_004635_120 Hb_002028_020 Hb_002028_020 Hb_009588_010--Hb_002028_020 Hb_000418_130 Hb_000418_130 Hb_009588_010--Hb_000418_130 Hb_009588_010--Hb_001488_230 Hb_004032_400 Hb_004032_400 Hb_009588_010--Hb_004032_400 Hb_009588_010--Hb_000042_280 Hb_003734_070 Hb_003734_070 Hb_009588_010--Hb_003734_070 Hb_012395_240--Hb_004635_120 Hb_006816_380 Hb_006816_380 Hb_012395_240--Hb_006816_380 Hb_000928_030 Hb_000928_030 Hb_012395_240--Hb_000928_030 Hb_012395_240--Hb_000000_390
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0995934 2.56797 2.47378 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 2.91324

CAGE analysis