Hb_000589_210

Information

Type -
Description -
Location Contig589: 201077-201334
Sequence    

Annotation

kegg
ID rcu:RCOM_0040480
description hypothetical protein
nr
ID XP_012088921.1
description PREDICTED: uncharacterized protein LOC105647439 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LCG0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01433 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000589_210 0.0 - - PREDICTED: uncharacterized protein LOC105647439 [Jatropha curcas]
2 Hb_002597_010 0.1499290892 - - PREDICTED: putative disease resistance protein RGA1 [Malus domestica]
3 Hb_011214_120 0.154626142 - - PREDICTED: uncharacterized protein LOC105636139 [Jatropha curcas]
4 Hb_025254_020 0.1780778502 - - PREDICTED: formate dehydrogenase, mitochondrial [Vitis vinifera]
5 Hb_080147_060 0.1801692644 - - PREDICTED: cyclin-dependent kinase F-1 isoform X1 [Jatropha curcas]
6 Hb_007545_140 0.1806435667 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105141503 [Populus euphratica]
7 Hb_001959_030 0.1896655182 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000915_070 0.1924732682 - - ATP binding protein, putative [Ricinus communis]
9 Hb_005144_180 0.1940065562 - - PREDICTED: protein enabled homolog [Populus euphratica]
10 Hb_098030_010 0.196084328 - - hypothetical protein JCGZ_06251 [Jatropha curcas]
11 Hb_000380_210 0.1976043892 - - Cyclic nucleotide-gated channel 15 [Theobroma cacao]
12 Hb_001369_140 0.1986500254 - - conserved hypothetical protein [Ricinus communis]
13 Hb_018133_110 0.200522787 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
14 Hb_014834_020 0.2017841598 - - PREDICTED: WAT1-related protein At5g47470-like isoform X1 [Jatropha curcas]
15 Hb_002016_020 0.2020243956 - - RALFL33, putative [Ricinus communis]
16 Hb_005152_010 0.2030406949 - - hypothetical protein JCGZ_22048 [Jatropha curcas]
17 Hb_012368_080 0.2032163675 - - PREDICTED: uncharacterized protein LOC105126277 [Populus euphratica]
18 Hb_000032_560 0.2036224979 - - hypothetical protein JCGZ_15037 [Jatropha curcas]
19 Hb_000364_200 0.2074138199 - - o-methyltransferase, putative [Ricinus communis]
20 Hb_001758_120 0.2077384335 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_000589_210 Hb_000589_210 Hb_002597_010 Hb_002597_010 Hb_000589_210--Hb_002597_010 Hb_011214_120 Hb_011214_120 Hb_000589_210--Hb_011214_120 Hb_025254_020 Hb_025254_020 Hb_000589_210--Hb_025254_020 Hb_080147_060 Hb_080147_060 Hb_000589_210--Hb_080147_060 Hb_007545_140 Hb_007545_140 Hb_000589_210--Hb_007545_140 Hb_001959_030 Hb_001959_030 Hb_000589_210--Hb_001959_030 Hb_000032_560 Hb_000032_560 Hb_002597_010--Hb_000032_560 Hb_000005_230 Hb_000005_230 Hb_002597_010--Hb_000005_230 Hb_002016_020 Hb_002016_020 Hb_002597_010--Hb_002016_020 Hb_002597_010--Hb_080147_060 Hb_000347_230 Hb_000347_230 Hb_002597_010--Hb_000347_230 Hb_018133_110 Hb_018133_110 Hb_002597_010--Hb_018133_110 Hb_011214_120--Hb_001959_030 Hb_098030_010 Hb_098030_010 Hb_011214_120--Hb_098030_010 Hb_000364_200 Hb_000364_200 Hb_011214_120--Hb_000364_200 Hb_011214_120--Hb_002016_020 Hb_014834_020 Hb_014834_020 Hb_011214_120--Hb_014834_020 Hb_000099_020 Hb_000099_020 Hb_025254_020--Hb_000099_020 Hb_025254_020--Hb_001959_030 Hb_025254_020--Hb_018133_110 Hb_002042_200 Hb_002042_200 Hb_025254_020--Hb_002042_200 Hb_025254_020--Hb_000032_560 Hb_025254_020--Hb_002016_020 Hb_000003_510 Hb_000003_510 Hb_080147_060--Hb_000003_510 Hb_000041_290 Hb_000041_290 Hb_080147_060--Hb_000041_290 Hb_080147_060--Hb_002016_020 Hb_000580_070 Hb_000580_070 Hb_080147_060--Hb_000580_070 Hb_080147_060--Hb_001959_030 Hb_032225_030 Hb_032225_030 Hb_007545_140--Hb_032225_030 Hb_007545_140--Hb_002597_010 Hb_005152_010 Hb_005152_010 Hb_007545_140--Hb_005152_010 Hb_001369_140 Hb_001369_140 Hb_007545_140--Hb_001369_140 Hb_000380_210 Hb_000380_210 Hb_007545_140--Hb_000380_210 Hb_001959_030--Hb_002042_200 Hb_001959_030--Hb_002016_020 Hb_001959_030--Hb_018133_110 Hb_001369_620 Hb_001369_620 Hb_001959_030--Hb_001369_620 Hb_000175_480 Hb_000175_480 Hb_001959_030--Hb_000175_480
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.57794 7.75949 17.0857 73.2194 1.50787 10.3131
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.40717 4.49778 1.75388 190.68 1.25576

CAGE analysis