Hb_000579_210

Information

Type -
Description -
Location Contig579: 222509-224308
Sequence    

Annotation

kegg
ID rcu:RCOM_1595320
description Taxadien-5-alpha-ol O-acetyltransferase, putative (EC:2.3.1.162)
nr
ID XP_012071918.1
description PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
swissprot
ID Q94CD1
description Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana GN=HHT1 PE=1 SV=1
trembl
ID A0A067L379
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04474 PE=4 SV=1
Gene Ontology
ID GO:0050638
description omega-hydroxypalmitate o-feruloyl transferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49787: 222568-223550
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000579_210 0.0 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
2 Hb_045786_010 0.0897027468 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
3 Hb_000188_140 0.1008034763 - - PREDICTED: germin-like protein subfamily 3 member 2 [Jatropha curcas]
4 Hb_000186_090 0.1017288126 - - ACC oxidase 1 [Hevea brasiliensis]
5 Hb_000628_060 0.1020519984 - - PREDICTED: calmodulin-like protein 5 [Solanum lycopersicum]
6 Hb_074100_010 0.1086587764 - - hypothetical protein JCGZ_23768 [Jatropha curcas]
7 Hb_029508_040 0.1087885086 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
8 Hb_000429_080 0.1170703297 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001766_140 0.1174348919 - - hypothetical protein JCGZ_18656 [Jatropha curcas]
10 Hb_032299_020 0.1178915032 - - tonoplast intrinsic protein, putative [Ricinus communis]
11 Hb_008196_010 0.1201059363 - - unnamed protein product [Coffea canephora]
12 Hb_000174_130 0.1204015206 - - flowering locus T-like protein [Fagus crenata]
13 Hb_166700_010 0.1207086253 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
14 Hb_006187_020 0.1229555047 - - PREDICTED: WAT1-related protein At5g07050-like [Populus euphratica]
15 Hb_003777_150 0.1235605717 - - PREDICTED: uncharacterized protein LOC105640938 isoform X1 [Jatropha curcas]
16 Hb_000152_630 0.1251107991 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 [Jatropha curcas]
17 Hb_103000_010 0.1257807288 - - hypothetical protein POPTR_0007s02210g [Populus trichocarpa]
18 Hb_084304_010 0.126226095 - - PREDICTED: probable auxin efflux carrier component 1c isoform X2 [Jatropha curcas]
19 Hb_000999_060 0.1263197801 - - hypothetical protein POPTR_0018s11350g [Populus trichocarpa]
20 Hb_002025_190 0.1263862459 - - PREDICTED: transcription factor bHLH111 [Jatropha curcas]

Gene co-expression network

sample Hb_000579_210 Hb_000579_210 Hb_045786_010 Hb_045786_010 Hb_000579_210--Hb_045786_010 Hb_000188_140 Hb_000188_140 Hb_000579_210--Hb_000188_140 Hb_000186_090 Hb_000186_090 Hb_000579_210--Hb_000186_090 Hb_000628_060 Hb_000628_060 Hb_000579_210--Hb_000628_060 Hb_074100_010 Hb_074100_010 Hb_000579_210--Hb_074100_010 Hb_029508_040 Hb_029508_040 Hb_000579_210--Hb_029508_040 Hb_009851_040 Hb_009851_040 Hb_045786_010--Hb_009851_040 Hb_045786_010--Hb_000628_060 Hb_000628_100 Hb_000628_100 Hb_045786_010--Hb_000628_100 Hb_008196_010 Hb_008196_010 Hb_045786_010--Hb_008196_010 Hb_000270_790 Hb_000270_790 Hb_045786_010--Hb_000270_790 Hb_000152_630 Hb_000152_630 Hb_000188_140--Hb_000152_630 Hb_000230_220 Hb_000230_220 Hb_000188_140--Hb_000230_220 Hb_069384_010 Hb_069384_010 Hb_000188_140--Hb_069384_010 Hb_000188_140--Hb_000186_090 Hb_000087_160 Hb_000087_160 Hb_000188_140--Hb_000087_160 Hb_084304_010 Hb_084304_010 Hb_000188_140--Hb_084304_010 Hb_000186_090--Hb_029508_040 Hb_000186_090--Hb_069384_010 Hb_000710_130 Hb_000710_130 Hb_000186_090--Hb_000710_130 Hb_000186_090--Hb_074100_010 Hb_002277_020 Hb_002277_020 Hb_000186_090--Hb_002277_020 Hb_003777_150 Hb_003777_150 Hb_000628_060--Hb_003777_150 Hb_004474_020 Hb_004474_020 Hb_000628_060--Hb_004474_020 Hb_081228_010 Hb_081228_010 Hb_000628_060--Hb_081228_010 Hb_000628_060--Hb_084304_010 Hb_004970_100 Hb_004970_100 Hb_000628_060--Hb_004970_100 Hb_074100_010--Hb_029508_040 Hb_000999_060 Hb_000999_060 Hb_074100_010--Hb_000999_060 Hb_002025_190 Hb_002025_190 Hb_074100_010--Hb_002025_190 Hb_009851_120 Hb_009851_120 Hb_074100_010--Hb_009851_120 Hb_001584_250 Hb_001584_250 Hb_074100_010--Hb_001584_250 Hb_029508_040--Hb_002277_020 Hb_029508_040--Hb_000999_060 Hb_029508_040--Hb_000710_130 Hb_029508_040--Hb_002025_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0803296 1.85305 1.32817 9.78634 0.0153502 0.0134427
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.043934 0.228953

CAGE analysis