Hb_000521_030

Information

Type -
Description -
Location Contig521: 16894-17361
Sequence    

Annotation

kegg
ID pop:POPTR_0001s23870g
description hypothetical protein
nr
ID XP_012092626.1
description PREDICTED: uncharacterized protein LOC105650350 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JCA4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05256 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000521_030 0.0 - - PREDICTED: uncharacterized protein LOC105650350 [Jatropha curcas]
2 Hb_009767_040 0.045260201 - - PREDICTED: uncharacterized protein LOC105127022 [Populus euphratica]
3 Hb_000327_350 0.0695354118 - - PREDICTED: 3-ketoacyl-CoA synthase 21-like [Jatropha curcas]
4 Hb_002757_040 0.0756989772 - - -
5 Hb_002785_020 0.0757157492 - - PREDICTED: laccase-4-like [Jatropha curcas]
6 Hb_000193_130 0.0775838696 - - nucleic acid binding protein, putative [Ricinus communis]
7 Hb_000816_090 0.0794178369 transcription factor TF Family: TRAF protein binding protein, putative [Ricinus communis]
8 Hb_010327_060 0.0829410945 - - hypothetical protein B456_001G246300 [Gossypium raimondii]
9 Hb_006249_010 0.0845235471 - - hypothetical protein JCGZ_13152 [Jatropha curcas]
10 Hb_002757_030 0.0845577054 - - unnamed protein product [Vitis vinifera]
11 Hb_000028_090 0.0856254586 - - PREDICTED: uncharacterized protein LOC105135810 [Populus euphratica]
12 Hb_000318_500 0.0864258607 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002734_020 0.0865147989 - - PREDICTED: uncharacterized protein LOC105631540 [Jatropha curcas]
14 Hb_012180_070 0.08996631 - - conserved hypothetical protein [Ricinus communis]
15 Hb_009620_080 0.090588671 - - hypothetical protein POPTR_0007s08150g [Populus trichocarpa]
16 Hb_000868_020 0.0907148708 - - -
17 Hb_003060_020 0.0912618943 - - serine carboxypeptidase, putative [Ricinus communis]
18 Hb_001401_130 0.0923695075 - - Calcium-binding EF-hand family protein, putative [Theobroma cacao]
19 Hb_003528_090 0.0925210969 - - Uncharacterized protein TCM_037169 [Theobroma cacao]
20 Hb_027577_010 0.0930549632 - - PREDICTED: uncharacterized protein LOC104779928 [Camelina sativa]

Gene co-expression network

sample Hb_000521_030 Hb_000521_030 Hb_009767_040 Hb_009767_040 Hb_000521_030--Hb_009767_040 Hb_000327_350 Hb_000327_350 Hb_000521_030--Hb_000327_350 Hb_002757_040 Hb_002757_040 Hb_000521_030--Hb_002757_040 Hb_002785_020 Hb_002785_020 Hb_000521_030--Hb_002785_020 Hb_000193_130 Hb_000193_130 Hb_000521_030--Hb_000193_130 Hb_000816_090 Hb_000816_090 Hb_000521_030--Hb_000816_090 Hb_009767_040--Hb_000193_130 Hb_009767_040--Hb_002785_020 Hb_003788_030 Hb_003788_030 Hb_009767_040--Hb_003788_030 Hb_009767_040--Hb_000327_350 Hb_004449_100 Hb_004449_100 Hb_009767_040--Hb_004449_100 Hb_000327_350--Hb_000816_090 Hb_003060_020 Hb_003060_020 Hb_000327_350--Hb_003060_020 Hb_003528_090 Hb_003528_090 Hb_000327_350--Hb_003528_090 Hb_000318_500 Hb_000318_500 Hb_000327_350--Hb_000318_500 Hb_000244_290 Hb_000244_290 Hb_000327_350--Hb_000244_290 Hb_010327_060 Hb_010327_060 Hb_002757_040--Hb_010327_060 Hb_000028_090 Hb_000028_090 Hb_002757_040--Hb_000028_090 Hb_002757_030 Hb_002757_030 Hb_002757_040--Hb_002757_030 Hb_009164_010 Hb_009164_010 Hb_002757_040--Hb_009164_010 Hb_009620_080 Hb_009620_080 Hb_002757_040--Hb_009620_080 Hb_000868_020 Hb_000868_020 Hb_002757_040--Hb_000868_020 Hb_000684_190 Hb_000684_190 Hb_002785_020--Hb_000684_190 Hb_000645_230 Hb_000645_230 Hb_002785_020--Hb_000645_230 Hb_002785_020--Hb_003788_030 Hb_002734_020 Hb_002734_020 Hb_002785_020--Hb_002734_020 Hb_001935_200 Hb_001935_200 Hb_002785_020--Hb_001935_200 Hb_000422_090 Hb_000422_090 Hb_002785_020--Hb_000422_090 Hb_057343_010 Hb_057343_010 Hb_000193_130--Hb_057343_010 Hb_000193_130--Hb_002785_020 Hb_000193_130--Hb_000327_350 Hb_000193_130--Hb_003788_030 Hb_000816_090--Hb_003060_020 Hb_006570_170 Hb_006570_170 Hb_000816_090--Hb_006570_170 Hb_005396_020 Hb_005396_020 Hb_000816_090--Hb_005396_020 Hb_000816_090--Hb_003528_090 Hb_001634_050 Hb_001634_050 Hb_000816_090--Hb_001634_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.00504 1.12756 82.6122 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0986057 12.7901

CAGE analysis