Hb_000362_050

Information

Type transcription factor
Description TF Family: NOZZLE
Location Contig362: 67253-69685
Sequence    

Annotation

kegg
ID rcu:RCOM_0519350
description hypothetical protein
nr
ID XP_012074214.1
description PREDICTED: uncharacterized protein LOC105635737 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KMS6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09838 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37201: 68001-68289
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000362_050 0.0 transcription factor TF Family: NOZZLE PREDICTED: uncharacterized protein LOC105635737 [Jatropha curcas]
2 Hb_000483_130 0.1302076046 - - PREDICTED: uncharacterized protein LOC105644062 isoform X1 [Jatropha curcas]
3 Hb_000210_140 0.1365237191 - - PREDICTED: uncharacterized protein LOC105635827 [Jatropha curcas]
4 Hb_006153_130 0.1511953571 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
5 Hb_002119_070 0.151491009 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
6 Hb_007943_020 0.151529654 - - transcription factor, putative [Ricinus communis]
7 Hb_002970_070 0.1516140288 - - multidrug/pheromone exporter protein [Hevea brasiliensis]
8 Hb_003226_030 0.1570425967 - - sucrose synthase 5 [Hevea brasiliensis]
9 Hb_000020_030 0.1608902041 - - protein binding protein, putative [Ricinus communis]
10 Hb_009615_100 0.1641157725 - - hypothetical protein JCGZ_24459 [Jatropha curcas]
11 Hb_007632_130 0.166046964 - - PREDICTED: nudix hydrolase 10-like isoform X1 [Jatropha curcas]
12 Hb_000994_100 0.1672506731 - - RALFL33, putative [Ricinus communis]
13 Hb_002042_160 0.1692674424 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
14 Hb_001486_060 0.1710376906 - - PREDICTED: uncharacterized protein LOC105632622 [Jatropha curcas]
15 Hb_116194_010 0.1744403382 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
16 Hb_001564_090 0.1762285051 - - conserved hypothetical protein [Ricinus communis]
17 Hb_010417_090 0.1773081073 - - PREDICTED: protein LURP-one-related 17 [Jatropha curcas]
18 Hb_000115_290 0.1773727755 - - PREDICTED: uncharacterized protein LOC105124123 [Populus euphratica]
19 Hb_005288_210 0.178040011 - - hypothetical protein VITISV_017217 [Vitis vinifera]
20 Hb_002477_080 0.1780901478 - - hypothetical protein RCOM_0653450 [Ricinus communis]

Gene co-expression network

sample Hb_000362_050 Hb_000362_050 Hb_000483_130 Hb_000483_130 Hb_000362_050--Hb_000483_130 Hb_000210_140 Hb_000210_140 Hb_000362_050--Hb_000210_140 Hb_006153_130 Hb_006153_130 Hb_000362_050--Hb_006153_130 Hb_002119_070 Hb_002119_070 Hb_000362_050--Hb_002119_070 Hb_007943_020 Hb_007943_020 Hb_000362_050--Hb_007943_020 Hb_002970_070 Hb_002970_070 Hb_000362_050--Hb_002970_070 Hb_003226_030 Hb_003226_030 Hb_000483_130--Hb_003226_030 Hb_000095_070 Hb_000095_070 Hb_000483_130--Hb_000095_070 Hb_073808_010 Hb_073808_010 Hb_000483_130--Hb_073808_010 Hb_001486_060 Hb_001486_060 Hb_000483_130--Hb_001486_060 Hb_000483_130--Hb_007943_020 Hb_000210_140--Hb_006153_130 Hb_001856_160 Hb_001856_160 Hb_000210_140--Hb_001856_160 Hb_003847_050 Hb_003847_050 Hb_000210_140--Hb_003847_050 Hb_003788_010 Hb_003788_010 Hb_000210_140--Hb_003788_010 Hb_000210_140--Hb_007943_020 Hb_029260_010 Hb_029260_010 Hb_000210_140--Hb_029260_010 Hb_006153_130--Hb_001856_160 Hb_002236_010 Hb_002236_010 Hb_006153_130--Hb_002236_010 Hb_007625_030 Hb_007625_030 Hb_006153_130--Hb_007625_030 Hb_000847_050 Hb_000847_050 Hb_006153_130--Hb_000847_050 Hb_009615_100 Hb_009615_100 Hb_006153_130--Hb_009615_100 Hb_010605_010 Hb_010605_010 Hb_002119_070--Hb_010605_010 Hb_004531_110 Hb_004531_110 Hb_002119_070--Hb_004531_110 Hb_002928_120 Hb_002928_120 Hb_002119_070--Hb_002928_120 Hb_001071_060 Hb_001071_060 Hb_002119_070--Hb_001071_060 Hb_151706_010 Hb_151706_010 Hb_002119_070--Hb_151706_010 Hb_000347_420 Hb_000347_420 Hb_007943_020--Hb_000347_420 Hb_007943_020--Hb_003226_030 Hb_007943_020--Hb_029260_010 Hb_000020_030 Hb_000020_030 Hb_007943_020--Hb_000020_030 Hb_002042_160 Hb_002042_160 Hb_007943_020--Hb_002042_160 Hb_138606_020 Hb_138606_020 Hb_007943_020--Hb_138606_020 Hb_000994_100 Hb_000994_100 Hb_002970_070--Hb_000994_100 Hb_002970_070--Hb_002042_160 Hb_055529_010 Hb_055529_010 Hb_002970_070--Hb_055529_010 Hb_010417_090 Hb_010417_090 Hb_002970_070--Hb_010417_090 Hb_130967_010 Hb_130967_010 Hb_002970_070--Hb_130967_010 Hb_002970_070--Hb_000020_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.71341 0.326863 2.71949 0.0530699 0.347485
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0202885 0 2.11737 0.939738

CAGE analysis