Hb_000210_250

Information

Type -
Description -
Location Contig210: 268652-270632
Sequence    

Annotation

kegg
ID rcu:RCOM_0437780
description hypothetical protein
nr
ID XP_012074326.1
description PREDICTED: testis-expressed sequence 10 protein isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KV24
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08764 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000210_250 0.0 - - PREDICTED: testis-expressed sequence 10 protein isoform X1 [Jatropha curcas]
2 Hb_000521_330 0.0898841724 - - conserved hypothetical protein [Ricinus communis]
3 Hb_009296_070 0.0970479281 - - PREDICTED: cyclin-dependent kinase D-3 isoform X1 [Jatropha curcas]
4 Hb_000189_600 0.1000545691 - - PREDICTED: protein MON2 homolog isoform X1 [Jatropha curcas]
5 Hb_001377_190 0.1021744136 transcription factor TF Family: PHD PREDICTED: histone-lysine N-methyltransferase ATX3 isoform X2 [Jatropha curcas]
6 Hb_002007_150 0.1052310608 - - -
7 Hb_000617_230 0.1086174143 - - PREDICTED: tafazzin isoform X1 [Jatropha curcas]
8 Hb_003849_110 0.1095353987 - - hypothetical protein JCGZ_17842 [Jatropha curcas]
9 Hb_000282_090 0.1106399335 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
10 Hb_002400_340 0.1107610389 - - PREDICTED: probable beta-1,3-galactosyltransferase 10 [Jatropha curcas]
11 Hb_004109_320 0.1125156051 - - PREDICTED: vacuolar protein sorting-associated protein 52 A [Jatropha curcas]
12 Hb_000025_730 0.1127867635 - - PREDICTED: 60S ribosomal protein L2, mitochondrial [Jatropha curcas]
13 Hb_005488_020 0.1134533992 - - PREDICTED: putative mediator of RNA polymerase II transcription subunit 26 [Jatropha curcas]
14 Hb_003428_010 0.1135292559 - - PREDICTED: probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Jatropha curcas]
15 Hb_000339_040 0.1138524529 - - PREDICTED: SAP30-binding protein isoform X2 [Jatropha curcas]
16 Hb_012239_070 0.1144196631 - - PREDICTED: uncharacterized protein LOC105634113 [Jatropha curcas]
17 Hb_005214_140 0.1146927182 - - PREDICTED: transcription factor GTE2-like [Jatropha curcas]
18 Hb_000086_420 0.1147655523 - - PREDICTED: phospholipid--sterol O-acyltransferase [Jatropha curcas]
19 Hb_002820_030 0.1148523838 - - PREDICTED: uncharacterized protein LOC105638922 [Jatropha curcas]
20 Hb_004787_050 0.1152302 - - PREDICTED: RINT1-like protein MAG2 [Jatropha curcas]

Gene co-expression network

sample Hb_000210_250 Hb_000210_250 Hb_000521_330 Hb_000521_330 Hb_000210_250--Hb_000521_330 Hb_009296_070 Hb_009296_070 Hb_000210_250--Hb_009296_070 Hb_000189_600 Hb_000189_600 Hb_000210_250--Hb_000189_600 Hb_001377_190 Hb_001377_190 Hb_000210_250--Hb_001377_190 Hb_002007_150 Hb_002007_150 Hb_000210_250--Hb_002007_150 Hb_000617_230 Hb_000617_230 Hb_000210_250--Hb_000617_230 Hb_002492_010 Hb_002492_010 Hb_000521_330--Hb_002492_010 Hb_004143_100 Hb_004143_100 Hb_000521_330--Hb_004143_100 Hb_000521_330--Hb_000189_600 Hb_000089_180 Hb_000089_180 Hb_000521_330--Hb_000089_180 Hb_000029_060 Hb_000029_060 Hb_000521_330--Hb_000029_060 Hb_003906_200 Hb_003906_200 Hb_000521_330--Hb_003906_200 Hb_005588_080 Hb_005588_080 Hb_009296_070--Hb_005588_080 Hb_003861_060 Hb_003861_060 Hb_009296_070--Hb_003861_060 Hb_010578_080 Hb_010578_080 Hb_009296_070--Hb_010578_080 Hb_062226_130 Hb_062226_130 Hb_009296_070--Hb_062226_130 Hb_003878_090 Hb_003878_090 Hb_009296_070--Hb_003878_090 Hb_000365_230 Hb_000365_230 Hb_009296_070--Hb_000365_230 Hb_004333_040 Hb_004333_040 Hb_000189_600--Hb_004333_040 Hb_183433_010 Hb_183433_010 Hb_000189_600--Hb_183433_010 Hb_000189_600--Hb_000617_230 Hb_000189_600--Hb_001377_190 Hb_001430_080 Hb_001430_080 Hb_000189_600--Hb_001430_080 Hb_007413_010 Hb_007413_010 Hb_001377_190--Hb_007413_010 Hb_006913_020 Hb_006913_020 Hb_001377_190--Hb_006913_020 Hb_000363_310 Hb_000363_310 Hb_001377_190--Hb_000363_310 Hb_000749_010 Hb_000749_010 Hb_001377_190--Hb_000749_010 Hb_001925_060 Hb_001925_060 Hb_001377_190--Hb_001925_060 Hb_003849_110 Hb_003849_110 Hb_002007_150--Hb_003849_110 Hb_002007_150--Hb_000521_330 Hb_002007_150--Hb_003906_200 Hb_003464_090 Hb_003464_090 Hb_002007_150--Hb_003464_090 Hb_000347_250 Hb_000347_250 Hb_002007_150--Hb_000347_250 Hb_000868_090 Hb_000868_090 Hb_002007_150--Hb_000868_090 Hb_000617_230--Hb_001430_080 Hb_001878_050 Hb_001878_050 Hb_000617_230--Hb_001878_050 Hb_003835_070 Hb_003835_070 Hb_000617_230--Hb_003835_070 Hb_001279_170 Hb_001279_170 Hb_000617_230--Hb_001279_170 Hb_001009_280 Hb_001009_280 Hb_000617_230--Hb_001009_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.88155 3.90203 3.46126 2.67283 1.51413 1.43851
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.7625 2.81312 2.24855 3.21494 3.58169

CAGE analysis