Hb_000032_610

Information

Type -
Description -
Location Contig32: 451374-454330
Sequence    

Annotation

kegg
ID pop:POPTR_0003s14190g
description POPTRDRAFT_830876; hypothetical protein
nr
ID XP_012086687.1
description PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like [Jatropha curcas]
swissprot
ID P52410
description 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=2 SV=2
trembl
ID A0A067JZ53
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20426 PE=3 SV=1
Gene Ontology
ID GO:0016747
description 3-oxoacyl-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000032_610 0.0 - - PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like [Jatropha curcas]
2 Hb_000465_410 0.0947312012 - - conserved hypothetical protein [Ricinus communis]
3 Hb_005237_020 0.1025405928 - - Kinesin heavy chain, putative [Ricinus communis]
4 Hb_002701_070 0.1088481448 - - PREDICTED: uncharacterized protein LOC105646760 [Jatropha curcas]
5 Hb_001180_010 0.112893594 - - PREDICTED: glucan endo-1,3-beta-glucosidase 9 [Jatropha curcas]
6 Hb_019613_030 0.1133484393 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase CLF [Jatropha curcas]
7 Hb_048476_140 0.1162184937 - - PREDICTED: dynamin-related protein 1C [Jatropha curcas]
8 Hb_000352_280 0.1188145573 - - PREDICTED: acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal isoform X2 [Jatropha curcas]
9 Hb_074197_030 0.1197995783 - - unnamed protein product [Vitis vinifera]
10 Hb_021346_050 0.1255532275 - - xylulose kinase, putative [Ricinus communis]
11 Hb_172426_060 0.1267156726 - - PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Jatropha curcas]
12 Hb_004994_330 0.1296469184 - - DNA binding protein, putative [Ricinus communis]
13 Hb_000749_260 0.1327668383 - - PREDICTED: protochlorophyllide reductase, chloroplastic [Jatropha curcas]
14 Hb_005839_090 0.1331441639 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At3g56230 isoform X1 [Populus euphratica]
15 Hb_001544_050 0.1335560157 - - PREDICTED: U-box domain-containing protein 11-like [Jatropha curcas]
16 Hb_041692_010 0.1346637389 - - annexin [Manihot esculenta]
17 Hb_006816_250 0.1363481239 - - PREDICTED: uncharacterized protein LOC105647444 [Jatropha curcas]
18 Hb_002636_060 0.1389647415 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000207_350 0.1390252726 - - PREDICTED: embryogenesis-associated protein EMB8 [Jatropha curcas]
20 Hb_008725_090 0.1408609741 - - PREDICTED: uncharacterized protein LOC105642581 [Jatropha curcas]

Gene co-expression network

sample Hb_000032_610 Hb_000032_610 Hb_000465_410 Hb_000465_410 Hb_000032_610--Hb_000465_410 Hb_005237_020 Hb_005237_020 Hb_000032_610--Hb_005237_020 Hb_002701_070 Hb_002701_070 Hb_000032_610--Hb_002701_070 Hb_001180_010 Hb_001180_010 Hb_000032_610--Hb_001180_010 Hb_019613_030 Hb_019613_030 Hb_000032_610--Hb_019613_030 Hb_048476_140 Hb_048476_140 Hb_000032_610--Hb_048476_140 Hb_000465_410--Hb_002701_070 Hb_001544_050 Hb_001544_050 Hb_000465_410--Hb_001544_050 Hb_000465_410--Hb_001180_010 Hb_004994_330 Hb_004994_330 Hb_000465_410--Hb_004994_330 Hb_000749_260 Hb_000749_260 Hb_000465_410--Hb_000749_260 Hb_005237_020--Hb_000465_410 Hb_005237_020--Hb_002701_070 Hb_005237_020--Hb_019613_030 Hb_005237_020--Hb_000749_260 Hb_021346_050 Hb_021346_050 Hb_005237_020--Hb_021346_050 Hb_002701_070--Hb_001544_050 Hb_002701_070--Hb_001180_010 Hb_000958_120 Hb_000958_120 Hb_002701_070--Hb_000958_120 Hb_000996_080 Hb_000996_080 Hb_002701_070--Hb_000996_080 Hb_010868_040 Hb_010868_040 Hb_002701_070--Hb_010868_040 Hb_001180_010--Hb_001544_050 Hb_000076_030 Hb_000076_030 Hb_001180_010--Hb_000076_030 Hb_001180_010--Hb_004994_330 Hb_001180_010--Hb_048476_140 Hb_002374_470 Hb_002374_470 Hb_019613_030--Hb_002374_470 Hb_000392_260 Hb_000392_260 Hb_019613_030--Hb_000392_260 Hb_003702_060 Hb_003702_060 Hb_019613_030--Hb_003702_060 Hb_000711_030 Hb_000711_030 Hb_019613_030--Hb_000711_030 Hb_029920_010 Hb_029920_010 Hb_019613_030--Hb_029920_010 Hb_048476_140--Hb_000076_030 Hb_004041_050 Hb_004041_050 Hb_048476_140--Hb_004041_050 Hb_022693_110 Hb_022693_110 Hb_048476_140--Hb_022693_110 Hb_042083_030 Hb_042083_030 Hb_048476_140--Hb_042083_030 Hb_161396_010 Hb_161396_010 Hb_048476_140--Hb_161396_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.33245 1.25761 36.9638 22.506 0.551194 0.88171
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.72424 1.53721 2.07957 8.68597 28.3312

CAGE analysis