Hb_000022_240

Information

Type -
Description -
Location Contig22: 342990-344921
Sequence    

Annotation

kegg
ID pop:POPTR_0006s26110g
description POPTRDRAFT_819561; hypothetical protein
nr
ID XP_012077467.1
description PREDICTED: uncharacterized protein LOC105638288 [Jatropha curcas]
swissprot
ID Q9LX56
description F-box protein At3g59150 OS=Arabidopsis thaliana GN=At3g59150 PE=1 SV=1
trembl
ID A0A067KDG1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07802 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000022_240 0.0 - - PREDICTED: uncharacterized protein LOC105638288 [Jatropha curcas]
2 Hb_149985_020 0.0909213612 - - PREDICTED: zeatin O-glucosyltransferase-like [Nicotiana tomentosiformis]
3 Hb_001514_250 0.2409807346 - - GAST1 protein precursor, putative [Ricinus communis]
4 Hb_001054_110 0.2447113918 - - PREDICTED: U-box domain-containing protein 21-like [Jatropha curcas]
5 Hb_000532_150 0.2449752807 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
6 Hb_007163_050 0.2548926363 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA9 [Jatropha curcas]
7 Hb_011826_010 0.2589444289 - - Disease resistance protein RPM1, putative [Ricinus communis]
8 Hb_001269_090 0.2606838232 - - H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis]
9 Hb_000107_260 0.2648488873 - - -
10 Hb_002659_110 0.2661533399 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
11 Hb_066531_010 0.2704261862 - - ccd1, putative [Ricinus communis]
12 Hb_113676_010 0.2719988343 - - PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
13 Hb_130739_010 0.2724002551 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
14 Hb_002965_180 0.2747615046 - - AMSH-like ubiquitin thioesterase 3 [Morus notabilis]
15 Hb_000039_080 0.2787514268 - - cyclin d, putative [Ricinus communis]
16 Hb_000139_050 0.2808794792 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
17 Hb_012743_010 0.2809270399 - - phosphate transporter [Manihot esculenta]
18 Hb_158349_010 0.2815825694 - - plastid CUL1 [Hevea brasiliensis]
19 Hb_001459_040 0.2824254052 - - Ankyrin repeat-containing protein [Medicago truncatula]
20 Hb_000291_170 0.2836406501 - - PREDICTED: inactive rhomboid protein 1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000022_240 Hb_000022_240 Hb_149985_020 Hb_149985_020 Hb_000022_240--Hb_149985_020 Hb_001514_250 Hb_001514_250 Hb_000022_240--Hb_001514_250 Hb_001054_110 Hb_001054_110 Hb_000022_240--Hb_001054_110 Hb_000532_150 Hb_000532_150 Hb_000022_240--Hb_000532_150 Hb_007163_050 Hb_007163_050 Hb_000022_240--Hb_007163_050 Hb_011826_010 Hb_011826_010 Hb_000022_240--Hb_011826_010 Hb_000107_260 Hb_000107_260 Hb_149985_020--Hb_000107_260 Hb_149985_020--Hb_001514_250 Hb_001431_100 Hb_001431_100 Hb_149985_020--Hb_001431_100 Hb_000170_170 Hb_000170_170 Hb_149985_020--Hb_000170_170 Hb_149985_020--Hb_001054_110 Hb_001514_250--Hb_000532_150 Hb_001514_250--Hb_007163_050 Hb_000139_050 Hb_000139_050 Hb_001514_250--Hb_000139_050 Hb_062226_150 Hb_062226_150 Hb_001514_250--Hb_062226_150 Hb_002026_050 Hb_002026_050 Hb_001514_250--Hb_002026_050 Hb_000300_190 Hb_000300_190 Hb_001514_250--Hb_000300_190 Hb_137349_010 Hb_137349_010 Hb_001054_110--Hb_137349_010 Hb_000925_020 Hb_000925_020 Hb_001054_110--Hb_000925_020 Hb_000628_050 Hb_000628_050 Hb_001054_110--Hb_000628_050 Hb_005773_010 Hb_005773_010 Hb_001054_110--Hb_005773_010 Hb_004924_020 Hb_004924_020 Hb_001054_110--Hb_004924_020 Hb_064885_010 Hb_064885_010 Hb_001054_110--Hb_064885_010 Hb_001269_090 Hb_001269_090 Hb_000532_150--Hb_001269_090 Hb_012743_010 Hb_012743_010 Hb_000532_150--Hb_012743_010 Hb_000284_170 Hb_000284_170 Hb_000532_150--Hb_000284_170 Hb_113676_010 Hb_113676_010 Hb_000532_150--Hb_113676_010 Hb_000172_230 Hb_000172_230 Hb_000532_150--Hb_000172_230 Hb_188281_010 Hb_188281_010 Hb_007163_050--Hb_188281_010 Hb_007749_020 Hb_007749_020 Hb_007163_050--Hb_007749_020 Hb_007163_050--Hb_002026_050 Hb_000163_040 Hb_000163_040 Hb_007163_050--Hb_000163_040 Hb_000563_140 Hb_000563_140 Hb_007163_050--Hb_000563_140 Hb_000483_120 Hb_000483_120 Hb_011826_010--Hb_000483_120 Hb_119583_030 Hb_119583_030 Hb_011826_010--Hb_119583_030 Hb_057721_010 Hb_057721_010 Hb_011826_010--Hb_057721_010 Hb_000025_800 Hb_000025_800 Hb_011826_010--Hb_000025_800 Hb_002163_070 Hb_002163_070 Hb_011826_010--Hb_002163_070 Hb_010252_010 Hb_010252_010 Hb_011826_010--Hb_010252_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0289695 0.0829857 0.150669 0.238455 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0530868 0 0 0.00832112 0

CAGE analysis