Hb_005773_010

Information

Type -
Description -
Location Contig5773: 24718-42066
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005773_010 0.0 - - -
2 Hb_000072_010 0.0316100975 - - hypothetical protein B456_006G246700 [Gossypium raimondii]
3 Hb_104855_010 0.0568812226 - - -
4 Hb_000628_050 0.0618049164 - - nucleic acid binding protein, putative [Ricinus communis]
5 Hb_160950_010 0.0767745165 - - PREDICTED: uncharacterized protein LOC105761043 [Gossypium raimondii]
6 Hb_039440_010 0.0779587427 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000061_060 0.0835732641 transcription factor TF Family: MYB-related transcription factor MYB28 [Arabidopsis thaliana]
8 Hb_011671_360 0.0868701765 - - Hyoscyamine 6-dioxygenase, putative [Ricinus communis]
9 Hb_004241_190 0.0934238371 - - -
10 Hb_009083_020 0.0940553556 - - PREDICTED: thaumatin-like protein 1b [Jatropha curcas]
11 Hb_014361_140 0.1046979259 - - PREDICTED: peroxidase 51 [Jatropha curcas]
12 Hb_185437_010 0.1101200418 - - PREDICTED: uncharacterized protein LOC105637003 [Jatropha curcas]
13 Hb_010252_010 0.1115696263 - - -
14 Hb_005428_010 0.1147299209 - - cytochrome P450, putative [Ricinus communis]
15 Hb_128460_020 0.1155280854 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X1 [Nicotiana tomentosiformis]
16 Hb_137349_010 0.1172445886 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
17 Hb_182625_010 0.1185200351 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
18 Hb_173029_010 0.1185451663 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_053935_010 0.1194739224 - - hypothetical protein EUGRSUZ_G02294 [Eucalyptus grandis]
20 Hb_002849_010 0.1206063011 - - PREDICTED: putative UPF0481 protein At3g02645 [Jatropha curcas]

Gene co-expression network

sample Hb_005773_010 Hb_005773_010 Hb_000072_010 Hb_000072_010 Hb_005773_010--Hb_000072_010 Hb_104855_010 Hb_104855_010 Hb_005773_010--Hb_104855_010 Hb_000628_050 Hb_000628_050 Hb_005773_010--Hb_000628_050 Hb_160950_010 Hb_160950_010 Hb_005773_010--Hb_160950_010 Hb_039440_010 Hb_039440_010 Hb_005773_010--Hb_039440_010 Hb_000061_060 Hb_000061_060 Hb_005773_010--Hb_000061_060 Hb_000072_010--Hb_104855_010 Hb_011671_360 Hb_011671_360 Hb_000072_010--Hb_011671_360 Hb_000072_010--Hb_039440_010 Hb_005428_010 Hb_005428_010 Hb_000072_010--Hb_005428_010 Hb_000072_010--Hb_160950_010 Hb_104855_010--Hb_011671_360 Hb_104855_010--Hb_000061_060 Hb_182625_010 Hb_182625_010 Hb_104855_010--Hb_182625_010 Hb_014361_140 Hb_014361_140 Hb_104855_010--Hb_014361_140 Hb_004241_190 Hb_004241_190 Hb_000628_050--Hb_004241_190 Hb_173029_010 Hb_173029_010 Hb_000628_050--Hb_173029_010 Hb_000628_050--Hb_000061_060 Hb_000668_220 Hb_000668_220 Hb_000628_050--Hb_000668_220 Hb_053935_010 Hb_053935_010 Hb_000628_050--Hb_053935_010 Hb_009083_020 Hb_009083_020 Hb_160950_010--Hb_009083_020 Hb_010252_010 Hb_010252_010 Hb_160950_010--Hb_010252_010 Hb_002163_070 Hb_002163_070 Hb_160950_010--Hb_002163_070 Hb_160950_010--Hb_039440_010 Hb_000248_080 Hb_000248_080 Hb_160950_010--Hb_000248_080 Hb_185437_010 Hb_185437_010 Hb_160950_010--Hb_185437_010 Hb_039440_010--Hb_185437_010 Hb_001518_050 Hb_001518_050 Hb_039440_010--Hb_001518_050 Hb_039440_010--Hb_010252_010 Hb_039440_010--Hb_009083_020 Hb_000061_060--Hb_014361_140 Hb_128460_020 Hb_128460_020 Hb_000061_060--Hb_128460_020 Hb_000061_060--Hb_053935_010 Hb_000061_060--Hb_004241_190 Hb_158110_010 Hb_158110_010 Hb_000061_060--Hb_158110_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0712637 0.0686905 0.123124 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis