Hb_000163_040

Information

Type -
Description -
Location Contig163: 17855-18127
Sequence    

Annotation

kegg
ID rcu:RCOM_1178650
description Indole-3-acetic acid-induced protein ARG2, putative
nr
ID XP_012082797.1
description PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Jatropha curcas]
swissprot
ID P32292
description Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata GN=ARG2 PE=2 SV=1
trembl
ID A0A067JZG1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13949 PE=4 SV=1
Gene Ontology
ID GO:0006950
description indole-3-acetic acid-induced protein arg2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 008_G17.ab1: 17607-18297

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000163_040 0.0 - - PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Jatropha curcas]
2 Hb_029576_070 0.1529337692 - - Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]
3 Hb_007163_050 0.1545545809 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA9 [Jatropha curcas]
4 Hb_087314_010 0.1556028671 - - -
5 Hb_005217_070 0.1563202761 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000139_050 0.1600261953 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
7 Hb_000563_140 0.1624961906 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
8 Hb_036029_020 0.1666122935 - - PREDICTED: patellin-3-like [Jatropha curcas]
9 Hb_048987_020 0.1720816046 - - hypothetical protein JCGZ_27055 [Jatropha curcas]
10 Hb_002965_060 0.1725886816 - - Protein COBRA precursor, putative [Ricinus communis]
11 Hb_071433_010 0.1726107806 - - lipid binding protein, putative [Ricinus communis]
12 Hb_001677_190 0.1746707153 - - ATP-binding cassette transporter, putative [Ricinus communis]
13 Hb_000975_090 0.1808866095 - - Zeamatin precursor, putative [Ricinus communis]
14 Hb_170632_010 0.181783063 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
15 Hb_180695_010 0.182002157 - - hypothetical protein CICLE_v10013449mg [Citrus clementina]
16 Hb_004970_100 0.1834682865 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
17 Hb_077694_020 0.185378161 - - SAUR family protein [Theobroma cacao]
18 Hb_002894_070 0.186467554 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein B [Jatropha curcas]
19 Hb_000373_260 0.1872298293 - - hypothetical protein POPTR_0002s06820g [Populus trichocarpa]
20 Hb_000010_220 0.1875404571 - - PREDICTED: uncharacterized protein LOC105640277 [Jatropha curcas]

Gene co-expression network

sample Hb_000163_040 Hb_000163_040 Hb_029576_070 Hb_029576_070 Hb_000163_040--Hb_029576_070 Hb_007163_050 Hb_007163_050 Hb_000163_040--Hb_007163_050 Hb_087314_010 Hb_087314_010 Hb_000163_040--Hb_087314_010 Hb_005217_070 Hb_005217_070 Hb_000163_040--Hb_005217_070 Hb_000139_050 Hb_000139_050 Hb_000163_040--Hb_000139_050 Hb_000563_140 Hb_000563_140 Hb_000163_040--Hb_000563_140 Hb_002597_030 Hb_002597_030 Hb_029576_070--Hb_002597_030 Hb_017549_010 Hb_017549_010 Hb_029576_070--Hb_017549_010 Hb_000120_600 Hb_000120_600 Hb_029576_070--Hb_000120_600 Hb_001856_130 Hb_001856_130 Hb_029576_070--Hb_001856_130 Hb_001677_190 Hb_001677_190 Hb_029576_070--Hb_001677_190 Hb_011355_020 Hb_011355_020 Hb_029576_070--Hb_011355_020 Hb_188281_010 Hb_188281_010 Hb_007163_050--Hb_188281_010 Hb_007749_020 Hb_007749_020 Hb_007163_050--Hb_007749_020 Hb_002026_050 Hb_002026_050 Hb_007163_050--Hb_002026_050 Hb_007163_050--Hb_000563_140 Hb_001514_250 Hb_001514_250 Hb_007163_050--Hb_001514_250 Hb_048987_020 Hb_048987_020 Hb_087314_010--Hb_048987_020 Hb_107495_060 Hb_107495_060 Hb_087314_010--Hb_107495_060 Hb_072670_010 Hb_072670_010 Hb_087314_010--Hb_072670_010 Hb_180695_010 Hb_180695_010 Hb_087314_010--Hb_180695_010 Hb_006721_060 Hb_006721_060 Hb_087314_010--Hb_006721_060 Hb_087314_010--Hb_029576_070 Hb_014549_010 Hb_014549_010 Hb_005217_070--Hb_014549_010 Hb_011826_010 Hb_011826_010 Hb_005217_070--Hb_011826_010 Hb_036602_010 Hb_036602_010 Hb_005217_070--Hb_036602_010 Hb_005217_070--Hb_006721_060 Hb_003489_010 Hb_003489_010 Hb_005217_070--Hb_003489_010 Hb_036029_020 Hb_036029_020 Hb_000139_050--Hb_036029_020 Hb_000139_050--Hb_029576_070 Hb_000139_050--Hb_002597_030 Hb_000010_220 Hb_000010_220 Hb_000139_050--Hb_000010_220 Hb_000139_050--Hb_001677_190 Hb_000139_050--Hb_017549_010 Hb_000890_120 Hb_000890_120 Hb_000563_140--Hb_000890_120 Hb_004970_100 Hb_004970_100 Hb_000563_140--Hb_004970_100 Hb_002900_180 Hb_002900_180 Hb_000563_140--Hb_002900_180 Hb_000568_020 Hb_000568_020 Hb_000563_140--Hb_000568_020 Hb_005214_050 Hb_005214_050 Hb_000563_140--Hb_005214_050 Hb_000243_340 Hb_000243_340 Hb_000563_140--Hb_000243_340
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.08788 203.541 354.325 865.443 2.04671 2.71046
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.9577 33.0805 6.14931 68.7083 11.6127

CAGE analysis