Hb_188303_010

Information

Type -
Description -
Location Contig188303: 3122-3821
Sequence    

Annotation

kegg
ID rcu:RCOM_1331600
description Disease resistance protein RFL1, putative (EC:3.1.3.16)
nr
ID XP_002521789.1
description Disease resistance protein RFL1, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S720
description Disease resistance protein RFL1, putative OS=Ricinus communis GN=RCOM_1331600 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_188303_010 0.0 - - Disease resistance protein RFL1, putative [Ricinus communis]
2 Hb_156696_010 0.2162985951 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
3 Hb_000367_310 0.2493751962 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
4 Hb_055305_010 0.2494376347 - - Disease resistance protein RFL1, putative [Ricinus communis]
5 Hb_005288_030 0.2496404173 - - PREDICTED: uncharacterized protein LOC105647760 [Jatropha curcas]
6 Hb_002461_070 0.2692969205 - - gibberellin 2-oxidase, putative [Ricinus communis]
7 Hb_009642_010 0.2712036876 - - Disease resistance protein RFL1, putative [Ricinus communis]
8 Hb_050203_010 0.2721376767 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
9 Hb_004044_030 0.2747820309 - - PREDICTED: uncharacterized protein LOC105639335 [Jatropha curcas]
10 Hb_000172_740 0.277186 - - HXXXD-type acyl-transferase family protein, putative [Theobroma cacao]
11 Hb_000165_190 0.2791896593 - - PREDICTED: U-box domain-containing protein 12-like [Jatropha curcas]
12 Hb_010162_010 0.2799628005 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
13 Hb_008001_020 0.2809648245 transcription factor TF Family: GRAS PREDICTED: protein SHORT-ROOT-like [Populus euphratica]
14 Hb_094637_010 0.2822184742 - - PREDICTED: uncharacterized protein LOC105642042 [Jatropha curcas]
15 Hb_001158_080 0.2834129277 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
16 Hb_000286_030 0.2845537605 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
17 Hb_001259_100 0.2845790739 - - chloride channel-like family protein [Populus trichocarpa]
18 Hb_000487_140 0.2850344124 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
19 Hb_001863_080 0.2892617426 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Jatropha curcas]
20 Hb_002551_090 0.2911121954 - - hypothetical protein JCGZ_17224 [Jatropha curcas]

Gene co-expression network

sample Hb_188303_010 Hb_188303_010 Hb_156696_010 Hb_156696_010 Hb_188303_010--Hb_156696_010 Hb_000367_310 Hb_000367_310 Hb_188303_010--Hb_000367_310 Hb_055305_010 Hb_055305_010 Hb_188303_010--Hb_055305_010 Hb_005288_030 Hb_005288_030 Hb_188303_010--Hb_005288_030 Hb_002461_070 Hb_002461_070 Hb_188303_010--Hb_002461_070 Hb_009642_010 Hb_009642_010 Hb_188303_010--Hb_009642_010 Hb_010162_010 Hb_010162_010 Hb_156696_010--Hb_010162_010 Hb_001006_030 Hb_001006_030 Hb_156696_010--Hb_001006_030 Hb_111147_010 Hb_111147_010 Hb_156696_010--Hb_111147_010 Hb_156696_010--Hb_002461_070 Hb_001998_260 Hb_001998_260 Hb_156696_010--Hb_001998_260 Hb_028008_030 Hb_028008_030 Hb_156696_010--Hb_028008_030 Hb_001408_050 Hb_001408_050 Hb_000367_310--Hb_001408_050 Hb_000928_040 Hb_000928_040 Hb_000367_310--Hb_000928_040 Hb_000367_310--Hb_055305_010 Hb_007919_040 Hb_007919_040 Hb_000367_310--Hb_007919_040 Hb_003576_050 Hb_003576_050 Hb_000367_310--Hb_003576_050 Hb_003453_030 Hb_003453_030 Hb_000367_310--Hb_003453_030 Hb_002551_090 Hb_002551_090 Hb_055305_010--Hb_002551_090 Hb_142332_010 Hb_142332_010 Hb_055305_010--Hb_142332_010 Hb_001838_050 Hb_001838_050 Hb_055305_010--Hb_001838_050 Hb_002750_010 Hb_002750_010 Hb_055305_010--Hb_002750_010 Hb_000616_050 Hb_000616_050 Hb_055305_010--Hb_000616_050 Hb_001454_410 Hb_001454_410 Hb_055305_010--Hb_001454_410 Hb_004156_010 Hb_004156_010 Hb_005288_030--Hb_004156_010 Hb_000165_190 Hb_000165_190 Hb_005288_030--Hb_000165_190 Hb_002660_100 Hb_002660_100 Hb_005288_030--Hb_002660_100 Hb_051100_010 Hb_051100_010 Hb_005288_030--Hb_051100_010 Hb_001481_020 Hb_001481_020 Hb_005288_030--Hb_001481_020 Hb_000608_020 Hb_000608_020 Hb_005288_030--Hb_000608_020 Hb_002461_070--Hb_010162_010 Hb_002461_070--Hb_001006_030 Hb_008001_020 Hb_008001_020 Hb_002461_070--Hb_008001_020 Hb_001821_030 Hb_001821_030 Hb_002461_070--Hb_001821_030 Hb_002374_060 Hb_002374_060 Hb_002461_070--Hb_002374_060 Hb_002122_040 Hb_002122_040 Hb_009642_010--Hb_002122_040 Hb_001105_200 Hb_001105_200 Hb_009642_010--Hb_001105_200 Hb_001158_080 Hb_001158_080 Hb_009642_010--Hb_001158_080 Hb_004712_020 Hb_004712_020 Hb_009642_010--Hb_004712_020 Hb_012807_140 Hb_012807_140 Hb_009642_010--Hb_012807_140 Hb_088916_010 Hb_088916_010 Hb_009642_010--Hb_088916_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.668777 0 0.761438 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.422032 1.28916 0.155639

CAGE analysis