Hb_184705_010

Information

Type -
Description -
Location Contig184705: 859-3476
Sequence    

Annotation

kegg
ID cic:CICLE_v10002149mg
description hypothetical protein
nr
ID XP_012071365.1
description PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JCX9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03328 PE=4 SV=1
Gene Ontology
ID GO:0016740
description serine threonine-protein kinase-like protein ccr3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_184705_010 0.0 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
2 Hb_003384_070 0.2219488975 - - PREDICTED: methylesterase 17-like [Populus euphratica]
3 Hb_011382_050 0.2372894231 - - hypothetical protein PRUPE_ppa025935mg [Prunus persica]
4 Hb_008983_060 0.2375921685 desease resistance Gene Name: NB-ARC NB-ARC domain-containing disease resistance protein, putative [Theobroma cacao]
5 Hb_000017_150 0.2412492458 - - hypothetical protein POPTR_0001s09780g [Populus trichocarpa]
6 Hb_001999_190 0.2419780239 - - GDP-mannose transporter, putative [Ricinus communis]
7 Hb_000315_030 0.2449999342 - - carbohydrate binding protein, putative [Ricinus communis]
8 Hb_001148_020 0.252002648 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
9 Hb_007785_010 0.2636616654 - - glutathione peroxidase, putative [Ricinus communis]
10 Hb_015388_030 0.2689355811 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_001351_040 0.2735727443 - - PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Jatropha curcas]
12 Hb_003107_020 0.2797576526 - - hypothetical protein JCGZ_18656 [Jatropha curcas]
13 Hb_000640_150 0.2851803212 transcription factor TF Family: WRKY conserved hypothetical protein [Ricinus communis]
14 Hb_005839_100 0.2871939115 - - PREDICTED: APO protein 1, chloroplastic isoform X3 [Jatropha curcas]
15 Hb_010398_010 0.2924949421 - - PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 15a-like [Malus domestica]
16 Hb_009913_010 0.2957408388 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
17 Hb_000061_380 0.2963553501 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001103_040 0.2973857096 - - hypothetical protein POPTR_0013s11170g [Populus trichocarpa]
19 Hb_179679_010 0.301738976 - - PREDICTED: putative receptor-like protein kinase At4g00960 [Fragaria vesca subsp. vesca]
20 Hb_003073_170 0.3046779389 - - -

Gene co-expression network

sample Hb_184705_010 Hb_184705_010 Hb_003384_070 Hb_003384_070 Hb_184705_010--Hb_003384_070 Hb_011382_050 Hb_011382_050 Hb_184705_010--Hb_011382_050 Hb_008983_060 Hb_008983_060 Hb_184705_010--Hb_008983_060 Hb_000017_150 Hb_000017_150 Hb_184705_010--Hb_000017_150 Hb_001999_190 Hb_001999_190 Hb_184705_010--Hb_001999_190 Hb_000315_030 Hb_000315_030 Hb_184705_010--Hb_000315_030 Hb_003384_070--Hb_011382_050 Hb_141142_010 Hb_141142_010 Hb_003384_070--Hb_141142_010 Hb_001351_040 Hb_001351_040 Hb_003384_070--Hb_001351_040 Hb_003384_070--Hb_000315_030 Hb_101089_010 Hb_101089_010 Hb_003384_070--Hb_101089_010 Hb_000803_100 Hb_000803_100 Hb_003384_070--Hb_000803_100 Hb_011382_050--Hb_000017_150 Hb_011382_050--Hb_101089_010 Hb_001103_040 Hb_001103_040 Hb_011382_050--Hb_001103_040 Hb_011382_050--Hb_141142_010 Hb_004611_060 Hb_004611_060 Hb_011382_050--Hb_004611_060 Hb_008983_060--Hb_001999_190 Hb_000908_010 Hb_000908_010 Hb_008983_060--Hb_000908_010 Hb_001148_020 Hb_001148_020 Hb_008983_060--Hb_001148_020 Hb_001491_060 Hb_001491_060 Hb_008983_060--Hb_001491_060 Hb_000061_380 Hb_000061_380 Hb_008983_060--Hb_000061_380 Hb_010398_010 Hb_010398_010 Hb_000017_150--Hb_010398_010 Hb_137914_010 Hb_137914_010 Hb_000017_150--Hb_137914_010 Hb_000017_150--Hb_003384_070 Hb_000152_460 Hb_000152_460 Hb_000017_150--Hb_000152_460 Hb_000017_150--Hb_001103_040 Hb_001999_190--Hb_001491_060 Hb_000107_320 Hb_000107_320 Hb_001999_190--Hb_000107_320 Hb_001999_190--Hb_001148_020 Hb_005975_020 Hb_005975_020 Hb_001999_190--Hb_005975_020 Hb_000315_030--Hb_001351_040 Hb_000315_030--Hb_000061_380 Hb_003640_030 Hb_003640_030 Hb_000315_030--Hb_003640_030 Hb_000640_150 Hb_000640_150 Hb_000315_030--Hb_000640_150 Hb_002477_220 Hb_002477_220 Hb_000315_030--Hb_002477_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0638491 0.0682106 0 0.0641535 0.0477697 0.0224791
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0741838 0

CAGE analysis