Hb_179447_010

Information

Type -
Description -
Location Contig179447: 932-1294
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP31460.1
description hypothetical protein JCGZ_15340 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KGR8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15340 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_179447_010 0.0 - - hypothetical protein JCGZ_15340 [Jatropha curcas]
2 Hb_001014_200 0.2427029179 - - -
3 Hb_033883_050 0.2924946512 - - -
4 Hb_000875_100 0.2951804819 - - hypothetical protein JCGZ_04800 [Jatropha curcas]
5 Hb_011537_120 0.297082002 - - -
6 Hb_174005_010 0.3002384098 - - hypothetical protein EUGRSUZ_D00590 [Eucalyptus grandis]
7 Hb_032531_050 0.3049807235 - - hypothetical protein CICLE_v10003980mg [Citrus clementina]
8 Hb_005735_010 0.3149009194 - - DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
9 Hb_110486_010 0.321740414 - - -
10 Hb_053582_010 0.3235222812 - - -
11 Hb_000003_690 0.3304553282 - - -
12 Hb_121031_010 0.3327009734 - - PREDICTED: uncharacterized protein LOC104104926 [Nicotiana tomentosiformis]
13 Hb_000316_090 0.3358373941 - - -
14 Hb_034050_010 0.3397562498 - - PREDICTED: uncharacterized protein LOC103498182 [Cucumis melo]
15 Hb_002365_010 0.3398492903 - - hypothetical protein CISIN_1g0405342mg, partial [Citrus sinensis]
16 Hb_001377_440 0.3430233882 - - -
17 Hb_017134_020 0.3445307108 - - -
18 Hb_002988_020 0.3483804441 - - PREDICTED: uncharacterized protein LOC105637371 [Jatropha curcas]
19 Hb_000951_050 0.3488620036 - - -
20 Hb_056531_040 0.3507903451 - - PREDICTED: uncharacterized protein LOC103494239 [Cucumis melo]

Gene co-expression network

sample Hb_179447_010 Hb_179447_010 Hb_001014_200 Hb_001014_200 Hb_179447_010--Hb_001014_200 Hb_033883_050 Hb_033883_050 Hb_179447_010--Hb_033883_050 Hb_000875_100 Hb_000875_100 Hb_179447_010--Hb_000875_100 Hb_011537_120 Hb_011537_120 Hb_179447_010--Hb_011537_120 Hb_174005_010 Hb_174005_010 Hb_179447_010--Hb_174005_010 Hb_032531_050 Hb_032531_050 Hb_179447_010--Hb_032531_050 Hb_001014_200--Hb_000875_100 Hb_001014_200--Hb_011537_120 Hb_121031_010 Hb_121031_010 Hb_001014_200--Hb_121031_010 Hb_001014_200--Hb_033883_050 Hb_034050_010 Hb_034050_010 Hb_001014_200--Hb_034050_010 Hb_110486_010 Hb_110486_010 Hb_001014_200--Hb_110486_010 Hb_033883_050--Hb_110486_010 Hb_033883_050--Hb_174005_010 Hb_000906_050 Hb_000906_050 Hb_033883_050--Hb_000906_050 Hb_033883_050--Hb_011537_120 Hb_053582_010 Hb_053582_010 Hb_033883_050--Hb_053582_010 Hb_000875_100--Hb_121031_010 Hb_000875_100--Hb_034050_010 Hb_004162_300 Hb_004162_300 Hb_000875_100--Hb_004162_300 Hb_027014_010 Hb_027014_010 Hb_000875_100--Hb_027014_010 Hb_163115_010 Hb_163115_010 Hb_000875_100--Hb_163115_010 Hb_086287_020 Hb_086287_020 Hb_011537_120--Hb_086287_020 Hb_011537_120--Hb_000875_100 Hb_000003_690 Hb_000003_690 Hb_011537_120--Hb_000003_690 Hb_011537_120--Hb_110486_010 Hb_174005_010--Hb_053582_010 Hb_000005_210 Hb_000005_210 Hb_174005_010--Hb_000005_210 Hb_000041_170 Hb_000041_170 Hb_174005_010--Hb_000041_170 Hb_000047_040 Hb_000047_040 Hb_174005_010--Hb_000047_040 Hb_000072_260 Hb_000072_260 Hb_174005_010--Hb_000072_260 Hb_000081_170 Hb_000081_170 Hb_174005_010--Hb_000081_170 Hb_032531_040 Hb_032531_040 Hb_032531_050--Hb_032531_040 Hb_000002_030 Hb_000002_030 Hb_032531_050--Hb_000002_030 Hb_001454_110 Hb_001454_110 Hb_032531_050--Hb_001454_110 Hb_000316_090 Hb_000316_090 Hb_032531_050--Hb_000316_090 Hb_000805_300 Hb_000805_300 Hb_032531_050--Hb_000805_300 Hb_034579_010 Hb_034579_010 Hb_032531_050--Hb_034579_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 1.90809
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.483934 0 0.294351 0 0

CAGE analysis