Hb_157022_020

Information

Type -
Description -
Location Contig157022: 15878-18695
Sequence    

Annotation

kegg
ID rcu:RCOM_0521840
description nicotinamide mononucleotide adenylyltransferase, putative (EC:2.7.7.1)
nr
ID XP_002522739.1
description nicotinamide mononucleotide adenylyltransferase, putative [Ricinus communis]
swissprot
ID F4K687
description Nicotinamide/nicotinic acid mononucleotide adenylyltransferase OS=Arabidopsis thaliana GN=NMNAT PE=2 SV=1
trembl
ID B9S9S0
description Nicotinamide-nucleotide adenylyltransferase OS=Ricinus communis GN=RCOM_0521840 PE=3 SV=1
Gene Ontology
ID GO:0000309
description nicotinamide nicotinic acid mononucleotide adenylyltransferase isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13699: 15997-18618
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_157022_020 0.0 - - nicotinamide mononucleotide adenylyltransferase, putative [Ricinus communis]
2 Hb_002681_110 0.0866023302 - - PREDICTED: uncharacterized protein LOC105633759 [Jatropha curcas]
3 Hb_000922_270 0.0870123502 - - iron-sulfur cluster scaffold protein [Hevea brasiliensis]
4 Hb_003408_020 0.0883449295 - - hypothetical protein RCOM_0453040 [Ricinus communis]
5 Hb_000174_070 0.0923168553 - - PREDICTED: CMP-sialic acid transporter 2-like isoform X2 [Jatropha curcas]
6 Hb_002735_060 0.0923770667 - - PREDICTED: desumoylating isopeptidase 1 [Jatropha curcas]
7 Hb_092100_020 0.093335719 - - strictosidine synthase, putative [Ricinus communis]
8 Hb_000086_570 0.093415783 - - hypothetical protein JCGZ_24934 [Jatropha curcas]
9 Hb_002716_070 0.0964879332 - - PREDICTED: protein ABIL2 [Jatropha curcas]
10 Hb_001691_210 0.0979754729 transcription factor TF Family: C2C2-LSD hypothetical protein JCGZ_21436 [Jatropha curcas]
11 Hb_148209_120 0.0995043945 - - hypothetical protein CISIN_1g032846mg [Citrus sinensis]
12 Hb_003175_040 0.1001410087 - - PREDICTED: katanin p60 ATPase-containing subunit A1 isoform X1 [Jatropha curcas]
13 Hb_071736_020 0.1005129099 - - hypothetical protein POPTR_0006s10330g [Populus trichocarpa]
14 Hb_000089_160 0.1026014313 - - 60S ribosomal protein L5B [Hevea brasiliensis]
15 Hb_023226_090 0.1048961121 - - PREDICTED: glycolipid transfer protein [Jatropha curcas]
16 Hb_002539_080 0.1070997783 - - PREDICTED: triose phosphate/phosphate translocator, chloroplastic-like [Jatropha curcas]
17 Hb_001718_100 0.1077561153 - - PREDICTED: casein kinase II subunit beta-like isoform X5 [Jatropha curcas]
18 Hb_000172_030 0.1097339461 - - PREDICTED: protein SCO1 homolog 2, mitochondrial [Jatropha curcas]
19 Hb_002411_200 0.1103681793 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001863_480 0.1106086977 - - PREDICTED: uncharacterized protein LOC105630612 [Jatropha curcas]

Gene co-expression network

sample Hb_157022_020 Hb_157022_020 Hb_002681_110 Hb_002681_110 Hb_157022_020--Hb_002681_110 Hb_000922_270 Hb_000922_270 Hb_157022_020--Hb_000922_270 Hb_003408_020 Hb_003408_020 Hb_157022_020--Hb_003408_020 Hb_000174_070 Hb_000174_070 Hb_157022_020--Hb_000174_070 Hb_002735_060 Hb_002735_060 Hb_157022_020--Hb_002735_060 Hb_092100_020 Hb_092100_020 Hb_157022_020--Hb_092100_020 Hb_000029_030 Hb_000029_030 Hb_002681_110--Hb_000029_030 Hb_000115_060 Hb_000115_060 Hb_002681_110--Hb_000115_060 Hb_071736_020 Hb_071736_020 Hb_002681_110--Hb_071736_020 Hb_000317_030 Hb_000317_030 Hb_002681_110--Hb_000317_030 Hb_007919_050 Hb_007919_050 Hb_002681_110--Hb_007919_050 Hb_000922_270--Hb_003408_020 Hb_007666_020 Hb_007666_020 Hb_000922_270--Hb_007666_020 Hb_010172_070 Hb_010172_070 Hb_000922_270--Hb_010172_070 Hb_001711_030 Hb_001711_030 Hb_000922_270--Hb_001711_030 Hb_000051_040 Hb_000051_040 Hb_000922_270--Hb_000051_040 Hb_014720_080 Hb_014720_080 Hb_000922_270--Hb_014720_080 Hb_003175_040 Hb_003175_040 Hb_003408_020--Hb_003175_040 Hb_000220_050 Hb_000220_050 Hb_003408_020--Hb_000220_050 Hb_044662_070 Hb_044662_070 Hb_003408_020--Hb_044662_070 Hb_001863_480 Hb_001863_480 Hb_003408_020--Hb_001863_480 Hb_002527_070 Hb_002527_070 Hb_003408_020--Hb_002527_070 Hb_000025_120 Hb_000025_120 Hb_000174_070--Hb_000025_120 Hb_002411_200 Hb_002411_200 Hb_000174_070--Hb_002411_200 Hb_001105_070 Hb_001105_070 Hb_000174_070--Hb_001105_070 Hb_020178_070 Hb_020178_070 Hb_000174_070--Hb_020178_070 Hb_000496_060 Hb_000496_060 Hb_000174_070--Hb_000496_060 Hb_000174_070--Hb_014720_080 Hb_002539_080 Hb_002539_080 Hb_002735_060--Hb_002539_080 Hb_162275_030 Hb_162275_030 Hb_002735_060--Hb_162275_030 Hb_002735_060--Hb_092100_020 Hb_002735_060--Hb_001863_480 Hb_002716_070 Hb_002716_070 Hb_002735_060--Hb_002716_070 Hb_023226_090 Hb_023226_090 Hb_092100_020--Hb_023226_090 Hb_001369_050 Hb_001369_050 Hb_092100_020--Hb_001369_050 Hb_084849_020 Hb_084849_020 Hb_092100_020--Hb_084849_020 Hb_003050_230 Hb_003050_230 Hb_092100_020--Hb_003050_230 Hb_117134_010 Hb_117134_010 Hb_092100_020--Hb_117134_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.777 1.87316 1.98889 7.78497 11.1763 12.6326
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
30.0945 18.3603 19.9347 7.88878 2.60807

CAGE analysis