Hb_000317_030

Information

Type transcription factor
Description TF Family: ULT
Location Contig317: 19961-24738
Sequence    

Annotation

kegg
ID rcu:RCOM_1176240
description Protein ULTRAPETALA1, putative
nr
ID XP_012088345.1
description PREDICTED: protein ULTRAPETALA 1-like [Jatropha curcas]
swissprot
ID Q8GZA8
description Protein ULTRAPETALA 1 OS=Arabidopsis thaliana GN=ULT1 PE=1 SV=1
trembl
ID A0A067JJN2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25838 PE=4 SV=1
Gene Ontology
ID GO:0003677
description protein ultrapetala 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33337: 19986-24589 , PASA_asmbl_33338: 19976-24568
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000317_030 0.0 transcription factor TF Family: ULT PREDICTED: protein ULTRAPETALA 1-like [Jatropha curcas]
2 Hb_000576_010 0.0597577008 - - PREDICTED: uncharacterized protein LOC105638289 [Jatropha curcas]
3 Hb_004994_170 0.0807136867 - - PREDICTED: uncharacterized protein LOC105643024 [Jatropha curcas]
4 Hb_001671_080 0.0897626263 - - amino acid binding protein, putative [Ricinus communis]
5 Hb_002681_110 0.0920495862 - - PREDICTED: uncharacterized protein LOC105633759 [Jatropha curcas]
6 Hb_004223_130 0.0924743036 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002527_070 0.0927630165 - - axonemal dynein light chain, putative [Ricinus communis]
8 Hb_008066_010 0.094448202 - - PREDICTED: translation initiation factor eIF-2B subunit alpha-like [Jatropha curcas]
9 Hb_000975_290 0.0947247839 - - PREDICTED: 40S ribosomal protein S15a-1 [Jatropha curcas]
10 Hb_023386_080 0.0974853938 - - PREDICTED: peroxisome biogenesis protein 19-2-like [Jatropha curcas]
11 Hb_044662_070 0.0995798353 - - PREDICTED: hsp70-Hsp90 organizing protein 3 [Jatropha curcas]
12 Hb_000676_220 0.101927991 - - ADP-ribosylation factor, putative [Ricinus communis]
13 Hb_001604_010 0.1036140045 - - 14-3-3 protein, putative [Ricinus communis]
14 Hb_000220_050 0.1041407714 transcription factor TF Family: Orphans PREDICTED: putative zinc finger protein At1g68190 isoform X1 [Jatropha curcas]
15 Hb_011794_070 0.1044043068 - - PREDICTED: 60S ribosomal protein L36-2-like [Jatropha curcas]
16 Hb_002253_070 0.1052505922 transcription factor TF Family: NAC NAC transcription factor 042 [Jatropha curcas]
17 Hb_022250_040 0.1053393595 - - PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Jatropha curcas]
18 Hb_003408_020 0.1058679334 - - hypothetical protein RCOM_0453040 [Ricinus communis]
19 Hb_000412_110 0.1075607986 - - Rop4 [Hevea brasiliensis]
20 Hb_003376_120 0.1075994609 - - PREDICTED: cell number regulator 8 [Jatropha curcas]

Gene co-expression network

sample Hb_000317_030 Hb_000317_030 Hb_000576_010 Hb_000576_010 Hb_000317_030--Hb_000576_010 Hb_004994_170 Hb_004994_170 Hb_000317_030--Hb_004994_170 Hb_001671_080 Hb_001671_080 Hb_000317_030--Hb_001671_080 Hb_002681_110 Hb_002681_110 Hb_000317_030--Hb_002681_110 Hb_004223_130 Hb_004223_130 Hb_000317_030--Hb_004223_130 Hb_002527_070 Hb_002527_070 Hb_000317_030--Hb_002527_070 Hb_000576_010--Hb_004994_170 Hb_004204_070 Hb_004204_070 Hb_000576_010--Hb_004204_070 Hb_000576_010--Hb_004223_130 Hb_010381_070 Hb_010381_070 Hb_000576_010--Hb_010381_070 Hb_000975_290 Hb_000975_290 Hb_000576_010--Hb_000975_290 Hb_004994_170--Hb_004204_070 Hb_001404_100 Hb_001404_100 Hb_004994_170--Hb_001404_100 Hb_001135_050 Hb_001135_050 Hb_004994_170--Hb_001135_050 Hb_001246_090 Hb_001246_090 Hb_004994_170--Hb_001246_090 Hb_001671_080--Hb_004223_130 Hb_003052_100 Hb_003052_100 Hb_001671_080--Hb_003052_100 Hb_158092_070 Hb_158092_070 Hb_001671_080--Hb_158092_070 Hb_001671_080--Hb_000975_290 Hb_007908_020 Hb_007908_020 Hb_001671_080--Hb_007908_020 Hb_001047_020 Hb_001047_020 Hb_001671_080--Hb_001047_020 Hb_000029_030 Hb_000029_030 Hb_002681_110--Hb_000029_030 Hb_157022_020 Hb_157022_020 Hb_002681_110--Hb_157022_020 Hb_000115_060 Hb_000115_060 Hb_002681_110--Hb_000115_060 Hb_071736_020 Hb_071736_020 Hb_002681_110--Hb_071736_020 Hb_007919_050 Hb_007919_050 Hb_002681_110--Hb_007919_050 Hb_000017_120 Hb_000017_120 Hb_004223_130--Hb_000017_120 Hb_004223_130--Hb_158092_070 Hb_133271_020 Hb_133271_020 Hb_004223_130--Hb_133271_020 Hb_001030_120 Hb_001030_120 Hb_004223_130--Hb_001030_120 Hb_002272_250 Hb_002272_250 Hb_004223_130--Hb_002272_250 Hb_001427_120 Hb_001427_120 Hb_002527_070--Hb_001427_120 Hb_000861_040 Hb_000861_040 Hb_002527_070--Hb_000861_040 Hb_001711_030 Hb_001711_030 Hb_002527_070--Hb_001711_030 Hb_003408_030 Hb_003408_030 Hb_002527_070--Hb_003408_030 Hb_000983_100 Hb_000983_100 Hb_002527_070--Hb_000983_100 Hb_002352_010 Hb_002352_010 Hb_002527_070--Hb_002352_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
34.0594 6.65575 12.4522 7.07109 19.9927 25.9558
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
38.7568 27.4467 39.639 14.2848 3.13022

CAGE analysis