Hb_000025_120

Information

Type -
Description -
Location Contig25: 103818-112545
Sequence    

Annotation

kegg
ID rcu:RCOM_0974680
description hypothetical protein
nr
ID XP_012065828.1
description PREDICTED: uncharacterized protein LOC105628946 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L3Y2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22723 PE=4 SV=1
Gene Ontology
ID GO:0005730
description 3-phosphoinositide-dependent protein kinase-1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26050: 103811-112468
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000025_120 0.0 - - PREDICTED: uncharacterized protein LOC105628946 isoform X1 [Jatropha curcas]
2 Hb_000496_060 0.0542443776 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH3 [Jatropha curcas]
3 Hb_014720_080 0.062676287 - - iron-sulfur cluster scaffold protein [Hevea brasiliensis]
4 Hb_000347_410 0.0655737443 - - PREDICTED: transcription initiation factor TFIID subunit 9 [Jatropha curcas]
5 Hb_001105_070 0.0676099083 - - PREDICTED: uncharacterized protein LOC105632829 [Jatropha curcas]
6 Hb_000146_020 0.0697999292 - - PREDICTED: protein TIC 21, chloroplastic [Jatropha curcas]
7 Hb_000834_270 0.0701618087 - - PREDICTED: uncharacterized protein LOC105647032 isoform X2 [Jatropha curcas]
8 Hb_002963_010 0.0706016572 - - PREDICTED: autophagy-related protein 18b-like isoform X1 [Jatropha curcas]
9 Hb_002027_210 0.0706152578 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
10 Hb_001722_100 0.0709197075 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000625_070 0.07370686 transcription factor TF Family: CSD PREDICTED: cold shock domain-containing protein 3 [Jatropha curcas]
12 Hb_005432_030 0.0756399478 - - PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Gossypium raimondii]
13 Hb_000174_070 0.0788671764 - - PREDICTED: CMP-sialic acid transporter 2-like isoform X2 [Jatropha curcas]
14 Hb_004724_340 0.0797565553 - - PREDICTED: mitochondrial fission protein ELM1 [Jatropha curcas]
15 Hb_001833_110 0.0819427792 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002016_100 0.0823890306 - - Small nuclear ribonucleoprotein SM D3, putative [Ricinus communis]
17 Hb_007479_020 0.0826406617 - - PREDICTED: CMP-sialic acid transporter 5 [Jatropha curcas]
18 Hb_000170_010 0.0829113547 - - o-methyltransferase, putative [Ricinus communis]
19 Hb_000574_480 0.0837913052 - - PREDICTED: uncharacterized protein LOC105634837 [Jatropha curcas]
20 Hb_000123_170 0.0838492554 - - Rab3 [Hevea brasiliensis]

Gene co-expression network

sample Hb_000025_120 Hb_000025_120 Hb_000496_060 Hb_000496_060 Hb_000025_120--Hb_000496_060 Hb_014720_080 Hb_014720_080 Hb_000025_120--Hb_014720_080 Hb_000347_410 Hb_000347_410 Hb_000025_120--Hb_000347_410 Hb_001105_070 Hb_001105_070 Hb_000025_120--Hb_001105_070 Hb_000146_020 Hb_000146_020 Hb_000025_120--Hb_000146_020 Hb_000834_270 Hb_000834_270 Hb_000025_120--Hb_000834_270 Hb_005432_030 Hb_005432_030 Hb_000496_060--Hb_005432_030 Hb_003175_040 Hb_003175_040 Hb_000496_060--Hb_003175_040 Hb_117134_010 Hb_117134_010 Hb_000496_060--Hb_117134_010 Hb_000496_060--Hb_014720_080 Hb_001833_110 Hb_001833_110 Hb_000496_060--Hb_001833_110 Hb_001722_100 Hb_001722_100 Hb_014720_080--Hb_001722_100 Hb_021650_030 Hb_021650_030 Hb_014720_080--Hb_021650_030 Hb_002540_030 Hb_002540_030 Hb_014720_080--Hb_002540_030 Hb_014720_080--Hb_000146_020 Hb_014720_080--Hb_000834_270 Hb_000347_410--Hb_000146_020 Hb_029866_020 Hb_029866_020 Hb_000347_410--Hb_029866_020 Hb_003376_030 Hb_003376_030 Hb_000347_410--Hb_003376_030 Hb_004586_320 Hb_004586_320 Hb_000347_410--Hb_004586_320 Hb_000240_090 Hb_000240_090 Hb_000347_410--Hb_000240_090 Hb_005431_010 Hb_005431_010 Hb_001105_070--Hb_005431_010 Hb_012053_070 Hb_012053_070 Hb_001105_070--Hb_012053_070 Hb_000987_070 Hb_000987_070 Hb_001105_070--Hb_000987_070 Hb_009773_020 Hb_009773_020 Hb_001105_070--Hb_009773_020 Hb_065525_020 Hb_065525_020 Hb_001105_070--Hb_065525_020 Hb_000146_020--Hb_000834_270 Hb_000146_020--Hb_003376_030 Hb_007943_090 Hb_007943_090 Hb_000146_020--Hb_007943_090 Hb_002027_210 Hb_002027_210 Hb_000146_020--Hb_002027_210 Hb_008289_060 Hb_008289_060 Hb_000146_020--Hb_008289_060 Hb_002963_010 Hb_002963_010 Hb_000834_270--Hb_002963_010 Hb_012675_060 Hb_012675_060 Hb_000834_270--Hb_012675_060 Hb_010080_090 Hb_010080_090 Hb_000834_270--Hb_010080_090 Hb_002918_200 Hb_002918_200 Hb_000834_270--Hb_002918_200 Hb_000834_270--Hb_001722_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.1449 10.04 6.19991 13.0565 13.726 18.9982
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
45.0408 36.2736 31.5274 13.6617 8.76067

CAGE analysis