Hb_124393_010

Information

Type -
Description -
Location Contig124393: 407-805
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_124393_010 0.0 - - -
2 Hb_000059_040 0.2240752723 - - Uncharacterized protein TCM_020504 [Theobroma cacao]
3 Hb_074683_020 0.2264004022 - - PREDICTED: 60S ribosomal protein L27-3 [Jatropha curcas]
4 Hb_003682_050 0.228327704 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 8 [Jatropha curcas]
5 Hb_171554_090 0.2322134141 - - PREDICTED: 10 kDa chaperonin [Jatropha curcas]
6 Hb_000012_180 0.2334905363 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000125_120 0.2351286925 transcription factor TF Family: mTERF -
8 Hb_000270_200 0.2352910483 - - ATP binding protein, putative [Ricinus communis]
9 Hb_000175_090 0.2370502326 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000001_110 0.2376861637 - - conserved hypothetical protein [Ricinus communis]
11 Hb_010298_020 0.2385626447 - - PREDICTED: uncharacterized protein At2g02148 isoform X4 [Vitis vinifera]
12 Hb_007017_060 0.2402281096 - - PREDICTED: 5-formyltetrahydrofolate cyclo-ligase, mitochondrial-like [Jatropha curcas]
13 Hb_000976_260 0.2408074333 - - -
14 Hb_000085_240 0.2409320882 - - fimbrin, putative [Ricinus communis]
15 Hb_000014_170 0.24289054 - - hypothetical protein CISIN_1g0379742mg, partial [Citrus sinensis]
16 Hb_003091_010 0.2430823053 - - PREDICTED: uncharacterized protein LOC105131887 [Populus euphratica]
17 Hb_004117_030 0.243179485 - - PREDICTED: uncharacterized protein LOC104449809 [Eucalyptus grandis]
18 Hb_003142_070 0.2436340964 - - hypothetical protein F383_14657 [Gossypium arboreum]
19 Hb_025048_030 0.2458607857 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
20 Hb_005846_020 0.2463182522 - - PREDICTED: tubulin-folding cofactor C [Jatropha curcas]

Gene co-expression network

sample Hb_124393_010 Hb_124393_010 Hb_000059_040 Hb_000059_040 Hb_124393_010--Hb_000059_040 Hb_074683_020 Hb_074683_020 Hb_124393_010--Hb_074683_020 Hb_003682_050 Hb_003682_050 Hb_124393_010--Hb_003682_050 Hb_171554_090 Hb_171554_090 Hb_124393_010--Hb_171554_090 Hb_000012_180 Hb_000012_180 Hb_124393_010--Hb_000012_180 Hb_000125_120 Hb_000125_120 Hb_124393_010--Hb_000125_120 Hb_002505_040 Hb_002505_040 Hb_000059_040--Hb_002505_040 Hb_002073_040 Hb_002073_040 Hb_000059_040--Hb_002073_040 Hb_000009_590 Hb_000009_590 Hb_000059_040--Hb_000009_590 Hb_004586_190 Hb_004586_190 Hb_000059_040--Hb_004586_190 Hb_010315_050 Hb_010315_050 Hb_000059_040--Hb_010315_050 Hb_006588_090 Hb_006588_090 Hb_000059_040--Hb_006588_090 Hb_000093_130 Hb_000093_130 Hb_074683_020--Hb_000093_130 Hb_000808_060 Hb_000808_060 Hb_074683_020--Hb_000808_060 Hb_000264_060 Hb_000264_060 Hb_074683_020--Hb_000264_060 Hb_003581_110 Hb_003581_110 Hb_074683_020--Hb_003581_110 Hb_001227_110 Hb_001227_110 Hb_074683_020--Hb_001227_110 Hb_007416_200 Hb_007416_200 Hb_074683_020--Hb_007416_200 Hb_027380_160 Hb_027380_160 Hb_003682_050--Hb_027380_160 Hb_001926_040 Hb_001926_040 Hb_003682_050--Hb_001926_040 Hb_000521_140 Hb_000521_140 Hb_003682_050--Hb_000521_140 Hb_000085_240 Hb_000085_240 Hb_003682_050--Hb_000085_240 Hb_000001_110 Hb_000001_110 Hb_003682_050--Hb_000001_110 Hb_002687_140 Hb_002687_140 Hb_003682_050--Hb_002687_140 Hb_004502_030 Hb_004502_030 Hb_171554_090--Hb_004502_030 Hb_044662_040 Hb_044662_040 Hb_171554_090--Hb_044662_040 Hb_025236_040 Hb_025236_040 Hb_171554_090--Hb_025236_040 Hb_001951_260 Hb_001951_260 Hb_171554_090--Hb_001951_260 Hb_000058_040 Hb_000058_040 Hb_171554_090--Hb_000058_040 Hb_003633_130 Hb_003633_130 Hb_171554_090--Hb_003633_130 Hb_001565_100 Hb_001565_100 Hb_000012_180--Hb_001565_100 Hb_073973_170 Hb_073973_170 Hb_000012_180--Hb_073973_170 Hb_000012_180--Hb_074683_020 Hb_003813_200 Hb_003813_200 Hb_000012_180--Hb_003813_200 Hb_000038_130 Hb_000038_130 Hb_000012_180--Hb_000038_130 Hb_000307_170 Hb_000307_170 Hb_000012_180--Hb_000307_170 Hb_012670_140 Hb_012670_140 Hb_000125_120--Hb_012670_140 Hb_063100_010 Hb_063100_010 Hb_000125_120--Hb_063100_010 Hb_000244_300 Hb_000244_300 Hb_000125_120--Hb_000244_300 Hb_012799_110 Hb_012799_110 Hb_000125_120--Hb_012799_110 Hb_001720_010 Hb_001720_010 Hb_000125_120--Hb_001720_010 Hb_054865_090 Hb_054865_090 Hb_000125_120--Hb_054865_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.753019 0.460538 0.807102 0 0.985339 1.18652
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.400477 0.629132 0.25153 0 0

CAGE analysis