Hb_074783_010

Information

Type -
Description -
Location Contig74783: 3953-4519
Sequence    

Annotation

kegg
ID pop:POPTR_0005s23300g
description POPTRDRAFT_831592; hypothetical protein
nr
ID XP_012092212.1
description PREDICTED: uncharacterized protein LOC105649970 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JN34
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21906 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56720: 3527-4264
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_074783_010 0.0 - - PREDICTED: uncharacterized protein LOC105649970 [Jatropha curcas]
2 Hb_003647_060 0.0678522475 - - PREDICTED: uncharacterized protein LOC105646679 isoform X2 [Jatropha curcas]
3 Hb_002577_010 0.1138163616 - - PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
4 Hb_001021_130 0.1155375826 - - PREDICTED: uncharacterized protein LOC105642479 [Jatropha curcas]
5 Hb_000592_020 0.1249213885 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
6 Hb_001053_090 0.1328994377 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 30-like [Jatropha curcas]
7 Hb_034688_020 0.1421396288 - - PREDICTED: uncharacterized protein LOC105642050 [Jatropha curcas]
8 Hb_000230_390 0.1423396953 - - PREDICTED: F-box/kelch-repeat protein At3g23880 [Jatropha curcas]
9 Hb_007508_090 0.1439273546 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
10 Hb_000731_260 0.1442357049 - - hypothetical protein RCOM_0905090 [Ricinus communis]
11 Hb_010174_060 0.1442411522 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
12 Hb_000367_190 0.147243796 - - hypothetical protein RCOM_1470550 [Ricinus communis]
13 Hb_000367_260 0.1485509023 - - PREDICTED: uncharacterized protein LOC105640585 [Jatropha curcas]
14 Hb_003442_070 0.1509742282 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-8 [Jatropha curcas]
15 Hb_004200_020 0.1534673482 - - PREDICTED: uncharacterized protein LOC104878039 [Vitis vinifera]
16 Hb_000646_050 0.1558226572 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Jatropha curcas]
17 Hb_002218_010 0.156103763 transcription factor TF Family: Orphans ethylene receptor, putative [Ricinus communis]
18 Hb_065525_090 0.1568397955 - - PREDICTED: CASP-like protein 4C1 [Vitis vinifera]
19 Hb_000147_040 0.1573910289 - - PREDICTED: uncharacterized protein LOC105638298 [Jatropha curcas]
20 Hb_001504_330 0.1575197571 - - PREDICTED: F-box/kelch-repeat protein At3g06240-like [Jatropha curcas]

Gene co-expression network

sample Hb_074783_010 Hb_074783_010 Hb_003647_060 Hb_003647_060 Hb_074783_010--Hb_003647_060 Hb_002577_010 Hb_002577_010 Hb_074783_010--Hb_002577_010 Hb_001021_130 Hb_001021_130 Hb_074783_010--Hb_001021_130 Hb_000592_020 Hb_000592_020 Hb_074783_010--Hb_000592_020 Hb_001053_090 Hb_001053_090 Hb_074783_010--Hb_001053_090 Hb_034688_020 Hb_034688_020 Hb_074783_010--Hb_034688_020 Hb_007508_090 Hb_007508_090 Hb_003647_060--Hb_007508_090 Hb_003647_060--Hb_001021_130 Hb_000646_050 Hb_000646_050 Hb_003647_060--Hb_000646_050 Hb_005396_150 Hb_005396_150 Hb_003647_060--Hb_005396_150 Hb_000710_060 Hb_000710_060 Hb_003647_060--Hb_000710_060 Hb_004328_040 Hb_004328_040 Hb_002577_010--Hb_004328_040 Hb_002577_010--Hb_003647_060 Hb_000007_140 Hb_000007_140 Hb_002577_010--Hb_000007_140 Hb_004200_020 Hb_004200_020 Hb_002577_010--Hb_004200_020 Hb_165669_010 Hb_165669_010 Hb_002577_010--Hb_165669_010 Hb_010174_060 Hb_010174_060 Hb_001021_130--Hb_010174_060 Hb_001021_130--Hb_007508_090 Hb_000189_560 Hb_000189_560 Hb_001021_130--Hb_000189_560 Hb_001969_090 Hb_001969_090 Hb_001021_130--Hb_001969_090 Hb_020805_130 Hb_020805_130 Hb_000592_020--Hb_020805_130 Hb_002027_040 Hb_002027_040 Hb_000592_020--Hb_002027_040 Hb_000567_120 Hb_000567_120 Hb_000592_020--Hb_000567_120 Hb_004607_030 Hb_004607_030 Hb_000592_020--Hb_004607_030 Hb_000120_960 Hb_000120_960 Hb_000592_020--Hb_000120_960 Hb_000108_070 Hb_000108_070 Hb_000592_020--Hb_000108_070 Hb_000964_130 Hb_000964_130 Hb_001053_090--Hb_000964_130 Hb_000025_790 Hb_000025_790 Hb_001053_090--Hb_000025_790 Hb_001053_090--Hb_003647_060 Hb_012490_080 Hb_012490_080 Hb_001053_090--Hb_012490_080 Hb_010222_070 Hb_010222_070 Hb_001053_090--Hb_010222_070 Hb_002307_270 Hb_002307_270 Hb_001053_090--Hb_002307_270 Hb_001146_010 Hb_001146_010 Hb_034688_020--Hb_001146_010 Hb_000749_050 Hb_000749_050 Hb_034688_020--Hb_000749_050 Hb_000538_230 Hb_000538_230 Hb_034688_020--Hb_000538_230 Hb_005074_030 Hb_005074_030 Hb_034688_020--Hb_005074_030 Hb_000430_020 Hb_000430_020 Hb_034688_020--Hb_000430_020 Hb_000173_470 Hb_000173_470 Hb_034688_020--Hb_000173_470
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
24.3126 22.4117 8.34167 16.3948 3.45429 7.49347
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
24.8536 17.8021 36.1065 23.1545 9.60775

CAGE analysis