Hb_061700_010

Information

Type -
Description -
Location Contig61700: 4103-5304
Sequence    

Annotation

kegg
ID pmum:103335932
description putative UDP-rhamnose:rhamnosyltransferase 1
nr
ID XP_008237191.1
description PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Prunus mume]
swissprot
ID -
description -
trembl
ID E2CXI1
description Putative uncharacterized protein OS=Jatropha curcas PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51306: 4056-5673
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_061700_010 0.0 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Prunus mume]
2 Hb_108090_010 0.0515865515 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000421_040 0.0596107671 - - Peptide transporter, putative [Ricinus communis]
4 Hb_142204_010 0.0650666173 - - pyruvate decarboxylase [Saccharum officinarum]
5 Hb_000172_270 0.0657329366 - - hypothetical protein JCGZ_24087 [Jatropha curcas]
6 Hb_000557_080 0.0681246736 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000707_090 0.0710992427 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Jatropha curcas]
8 Hb_010172_040 0.0711397018 - - PREDICTED: BAG family molecular chaperone regulator 3-like isoform X1 [Jatropha curcas]
9 Hb_000130_250 0.0714915018 - - PREDICTED: protein trichome birefringence-like 31 [Jatropha curcas]
10 Hb_002662_070 0.0759160186 - - hypothetical protein JCGZ_16102 [Jatropha curcas]
11 Hb_000347_060 0.0764816335 - - PREDICTED: uncharacterized protein LOC105631356 [Jatropha curcas]
12 Hb_000227_360 0.0793050788 - - PREDICTED: mavicyanin [Jatropha curcas]
13 Hb_152868_020 0.0836246449 - - RecName: Full=2-methylbutanal oxime monooxygenase; AltName: Full=Cytochrome P450 71E7 [Manihot esculenta]
14 Hb_001289_040 0.0836314819 - - NDR1/HIN1-like 1 [Theobroma cacao]
15 Hb_011344_040 0.0856284329 - - PREDICTED: 21 kDa protein [Jatropha curcas]
16 Hb_003858_010 0.0861997003 - - xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum]
17 Hb_064396_020 0.086233235 - - hypothetical protein POPTR_0019s09950g [Populus trichocarpa]
18 Hb_007382_110 0.0871122063 - - PREDICTED: bidirectional sugar transporter N3 [Jatropha curcas]
19 Hb_001357_290 0.0885362186 - - PREDICTED: uncharacterized protein LOC105632986 [Jatropha curcas]
20 Hb_077027_010 0.0889110716 - - hypothetical protein JCGZ_04511 [Jatropha curcas]

Gene co-expression network

sample Hb_061700_010 Hb_061700_010 Hb_108090_010 Hb_108090_010 Hb_061700_010--Hb_108090_010 Hb_000421_040 Hb_000421_040 Hb_061700_010--Hb_000421_040 Hb_142204_010 Hb_142204_010 Hb_061700_010--Hb_142204_010 Hb_000172_270 Hb_000172_270 Hb_061700_010--Hb_000172_270 Hb_000557_080 Hb_000557_080 Hb_061700_010--Hb_000557_080 Hb_000707_090 Hb_000707_090 Hb_061700_010--Hb_000707_090 Hb_000227_360 Hb_000227_360 Hb_108090_010--Hb_000227_360 Hb_003858_010 Hb_003858_010 Hb_108090_010--Hb_003858_010 Hb_005440_040 Hb_005440_040 Hb_108090_010--Hb_005440_040 Hb_000130_250 Hb_000130_250 Hb_108090_010--Hb_000130_250 Hb_000531_030 Hb_000531_030 Hb_108090_010--Hb_000531_030 Hb_000421_040--Hb_000707_090 Hb_000421_040--Hb_000557_080 Hb_001289_040 Hb_001289_040 Hb_000421_040--Hb_001289_040 Hb_010172_040 Hb_010172_040 Hb_000421_040--Hb_010172_040 Hb_000421_040--Hb_000172_270 Hb_152868_020 Hb_152868_020 Hb_142204_010--Hb_152868_020 Hb_142204_010--Hb_000557_080 Hb_007382_110 Hb_007382_110 Hb_142204_010--Hb_007382_110 Hb_103225_040 Hb_103225_040 Hb_142204_010--Hb_103225_040 Hb_142204_010--Hb_003858_010 Hb_138977_010 Hb_138977_010 Hb_000172_270--Hb_138977_010 Hb_000172_270--Hb_010172_040 Hb_000172_270--Hb_001289_040 Hb_002809_180 Hb_002809_180 Hb_000172_270--Hb_002809_180 Hb_000557_080--Hb_001289_040 Hb_094439_040 Hb_094439_040 Hb_000557_080--Hb_094439_040 Hb_000557_080--Hb_000707_090 Hb_064396_020 Hb_064396_020 Hb_000557_080--Hb_064396_020 Hb_077027_010 Hb_077027_010 Hb_000557_080--Hb_077027_010 Hb_000707_090--Hb_007382_110 Hb_000707_090--Hb_001289_040 Hb_000343_070 Hb_000343_070 Hb_000707_090--Hb_000343_070 Hb_006895_010 Hb_006895_010 Hb_000707_090--Hb_006895_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0419731 0.561075 3.2909 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 2.11605

CAGE analysis