Hb_094439_040

Information

Type -
Description -
Location Contig94439: 46216-48810
Sequence    

Annotation

kegg
ID cit:102618288
description cytochrome P450 93A1-like
nr
ID XP_006490074.1
description PREDICTED: cytochrome P450 93A1-like [Citrus sinensis]
swissprot
ID G3GBK0
description Costunolide synthase OS=Cichorium intybus GN=CYP71BL3 PE=1 SV=1
trembl
ID A0A0D2RW70
description Gossypium raimondii chromosome 6, whole genome shotgun sequence OS=Gossypium raimondii GN=B456_006G140500 PE=4 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094439_040 0.0 - - PREDICTED: cytochrome P450 93A1-like [Citrus sinensis]
2 Hb_001289_040 0.0188077676 - - NDR1/HIN1-like 1 [Theobroma cacao]
3 Hb_000557_080 0.0445343144 - - conserved hypothetical protein [Ricinus communis]
4 Hb_077027_010 0.047438473 - - hypothetical protein JCGZ_04511 [Jatropha curcas]
5 Hb_064396_020 0.0517942511 - - hypothetical protein POPTR_0019s09950g [Populus trichocarpa]
6 Hb_006895_010 0.0566470996 - - PREDICTED: secologanin synthase-like [Citrus sinensis]
7 Hb_001097_170 0.0688916007 - - PREDICTED: protein NDR1 [Jatropha curcas]
8 Hb_000421_040 0.0746651102 - - Peptide transporter, putative [Ricinus communis]
9 Hb_000707_090 0.0761565154 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Jatropha curcas]
10 Hb_000172_270 0.0800283365 - - hypothetical protein JCGZ_24087 [Jatropha curcas]
11 Hb_003025_170 0.0809401079 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Jatropha curcas]
12 Hb_000485_100 0.0874121712 - - PREDICTED: putative UPF0481 protein At3g02645 [Populus euphratica]
13 Hb_061700_010 0.0952003201 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Prunus mume]
14 Hb_000580_200 0.0955115437 - - PREDICTED: pectinesterase 2 isoform X1 [Jatropha curcas]
15 Hb_135737_010 0.0957858604 - - hypothetical protein POPTR_0004s02760g [Populus trichocarpa]
16 Hb_151290_010 0.0962158156 - - unnamed protein product [Vitis vinifera]
17 Hb_010172_040 0.0963616065 - - PREDICTED: BAG family molecular chaperone regulator 3-like isoform X1 [Jatropha curcas]
18 Hb_104014_020 0.0976052199 - - PREDICTED: probable receptor-like protein kinase At5g39020 isoform X2 [Jatropha curcas]
19 Hb_003549_100 0.0984923587 - - PREDICTED: uncharacterized protein LOC105647410 [Jatropha curcas]
20 Hb_142204_010 0.1013101633 - - pyruvate decarboxylase [Saccharum officinarum]

Gene co-expression network

sample Hb_094439_040 Hb_094439_040 Hb_001289_040 Hb_001289_040 Hb_094439_040--Hb_001289_040 Hb_000557_080 Hb_000557_080 Hb_094439_040--Hb_000557_080 Hb_077027_010 Hb_077027_010 Hb_094439_040--Hb_077027_010 Hb_064396_020 Hb_064396_020 Hb_094439_040--Hb_064396_020 Hb_006895_010 Hb_006895_010 Hb_094439_040--Hb_006895_010 Hb_001097_170 Hb_001097_170 Hb_094439_040--Hb_001097_170 Hb_001289_040--Hb_000557_080 Hb_001289_040--Hb_077027_010 Hb_001289_040--Hb_006895_010 Hb_001289_040--Hb_064396_020 Hb_000421_040 Hb_000421_040 Hb_001289_040--Hb_000421_040 Hb_000707_090 Hb_000707_090 Hb_000557_080--Hb_000707_090 Hb_000557_080--Hb_064396_020 Hb_000557_080--Hb_077027_010 Hb_142204_010 Hb_142204_010 Hb_000557_080--Hb_142204_010 Hb_077027_010--Hb_064396_020 Hb_135737_010 Hb_135737_010 Hb_077027_010--Hb_135737_010 Hb_000392_500 Hb_000392_500 Hb_077027_010--Hb_000392_500 Hb_064396_020--Hb_135737_010 Hb_064396_020--Hb_000392_500 Hb_000485_100 Hb_000485_100 Hb_006895_010--Hb_000485_100 Hb_006895_010--Hb_000707_090 Hb_006895_010--Hb_000557_080 Hb_002391_010 Hb_002391_010 Hb_006895_010--Hb_002391_010 Hb_009158_040 Hb_009158_040 Hb_001097_170--Hb_009158_040 Hb_001097_170--Hb_001289_040 Hb_001053_120 Hb_001053_120 Hb_001097_170--Hb_001053_120 Hb_000023_100 Hb_000023_100 Hb_001097_170--Hb_000023_100 Hb_000172_270 Hb_000172_270 Hb_001097_170--Hb_000172_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0174785 0.0870811 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0813461

CAGE analysis