Hb_002391_010

Information

Type -
Description -
Location Contig2391: 7735-15651
Sequence    

Annotation

kegg
ID pop:POPTR_0007s09420g
description hypothetical protein
nr
ID XP_012065447.1
description PREDICTED: probable acyl-activating enzyme 1, peroxisomal [Jatropha curcas]
swissprot
ID F4HUK6
description Probable acyl-activating enzyme 1, peroxisomal OS=Arabidopsis thaliana GN=AAE1 PE=2 SV=1
trembl
ID A0A067L963
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22365 PE=4 SV=1
Gene Ontology
ID GO:0003824
description probable acyl-activating enzyme peroxisomal

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002391_010 0.0 - - PREDICTED: probable acyl-activating enzyme 1, peroxisomal [Jatropha curcas]
2 Hb_001926_080 0.0104638557 - - PREDICTED: uncharacterized protein LOC103454919 [Malus domestica]
3 Hb_000485_100 0.0222831597 - - PREDICTED: putative UPF0481 protein At3g02645 [Populus euphratica]
4 Hb_000224_190 0.0342194468 - - zinc finger protein, putative [Ricinus communis]
5 Hb_024723_010 0.04476423 - - PREDICTED: leucine-rich repeat receptor protein kinase EMS1-like [Jatropha curcas]
6 Hb_000111_490 0.053600003 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001345_050 0.054447422 - - hypothetical protein POPTR_0014s14480g [Populus trichocarpa]
8 Hb_072771_010 0.0544595489 - - Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis]
9 Hb_002326_010 0.0564247824 transcription factor TF Family: G2-like hypothetical protein RCOM_1592640 [Ricinus communis]
10 Hb_006895_010 0.0694950798 - - PREDICTED: secologanin synthase-like [Citrus sinensis]
11 Hb_008453_050 0.0707156871 - - PREDICTED: peroxidase 64 [Jatropha curcas]
12 Hb_185811_010 0.072850429 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
13 Hb_001981_050 0.07397077 - - PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Jatropha curcas]
14 Hb_000326_120 0.074939667 transcription factor TF Family: MYB-related transcription factor, putative [Ricinus communis]
15 Hb_154038_010 0.0761288448 - - cytochrome P450, putative [Ricinus communis]
16 Hb_001863_470 0.0777700481 - - PREDICTED: uncharacterized protein LOC105630613 [Jatropha curcas]
17 Hb_000917_300 0.0796564199 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Populus euphratica]
18 Hb_064445_020 0.08222383 - - PREDICTED: serine carboxypeptidase-like 34 [Populus euphratica]
19 Hb_004459_010 0.0838319596 - - PREDICTED: phospholipase A1-IIgamma-like [Jatropha curcas]
20 Hb_001593_040 0.0843585408 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]

Gene co-expression network

sample Hb_002391_010 Hb_002391_010 Hb_001926_080 Hb_001926_080 Hb_002391_010--Hb_001926_080 Hb_000485_100 Hb_000485_100 Hb_002391_010--Hb_000485_100 Hb_000224_190 Hb_000224_190 Hb_002391_010--Hb_000224_190 Hb_024723_010 Hb_024723_010 Hb_002391_010--Hb_024723_010 Hb_000111_490 Hb_000111_490 Hb_002391_010--Hb_000111_490 Hb_001345_050 Hb_001345_050 Hb_002391_010--Hb_001345_050 Hb_001926_080--Hb_000224_190 Hb_001926_080--Hb_000485_100 Hb_072771_010 Hb_072771_010 Hb_001926_080--Hb_072771_010 Hb_001926_080--Hb_001345_050 Hb_002326_010 Hb_002326_010 Hb_001926_080--Hb_002326_010 Hb_000485_100--Hb_024723_010 Hb_000485_100--Hb_000111_490 Hb_000485_100--Hb_000224_190 Hb_006895_010 Hb_006895_010 Hb_000485_100--Hb_006895_010 Hb_000224_190--Hb_002326_010 Hb_000224_190--Hb_072771_010 Hb_000224_190--Hb_001345_050 Hb_008453_050 Hb_008453_050 Hb_000224_190--Hb_008453_050 Hb_024723_010--Hb_000111_490 Hb_056506_040 Hb_056506_040 Hb_024723_010--Hb_056506_040 Hb_024723_010--Hb_001926_080 Hb_000326_120 Hb_000326_120 Hb_024723_010--Hb_000326_120 Hb_000111_490--Hb_056506_040 Hb_068804_190 Hb_068804_190 Hb_000111_490--Hb_068804_190 Hb_000111_490--Hb_001926_080 Hb_001345_050--Hb_072771_010 Hb_154038_010 Hb_154038_010 Hb_001345_050--Hb_154038_010 Hb_001345_050--Hb_008453_050 Hb_001345_050--Hb_002326_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0176113 0.0411285 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0423769

CAGE analysis