Hb_024723_010

Information

Type -
Description -
Location Contig24723: 159-950
Sequence    

Annotation

kegg
ID brp:103868842
description LRR receptor-like serine/threonine-protein kinase GSO2
nr
ID XP_012073900.1
description PREDICTED: leucine-rich repeat receptor protein kinase EMS1-like [Jatropha curcas]
swissprot
ID C0LGV1
description LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1
trembl
ID A0A067KSP2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09439 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_024723_010 0.0 - - PREDICTED: leucine-rich repeat receptor protein kinase EMS1-like [Jatropha curcas]
2 Hb_000111_490 0.0141060908 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000485_100 0.035476644 - - PREDICTED: putative UPF0481 protein At3g02645 [Populus euphratica]
4 Hb_002391_010 0.04476423 - - PREDICTED: probable acyl-activating enzyme 1, peroxisomal [Jatropha curcas]
5 Hb_056506_040 0.0471408918 - - -
6 Hb_001926_080 0.0538937757 - - PREDICTED: uncharacterized protein LOC103454919 [Malus domestica]
7 Hb_000326_120 0.0609705692 transcription factor TF Family: MYB-related transcription factor, putative [Ricinus communis]
8 Hb_068804_190 0.0660375346 - - kinase, putative [Ricinus communis]
9 Hb_005532_080 0.0701245791 - - PREDICTED: heparanase-like protein 2 [Jatropha curcas]
10 Hb_000343_070 0.0751477547 - - hypothetical protein JCGZ_06265 [Jatropha curcas]
11 Hb_001278_120 0.0759554293 - - PREDICTED: reticulon-like protein B14 [Jatropha curcas]
12 Hb_007382_110 0.0772774174 - - PREDICTED: bidirectional sugar transporter N3 [Jatropha curcas]
13 Hb_000224_190 0.078727032 - - zinc finger protein, putative [Ricinus communis]
14 Hb_000707_090 0.082020461 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Jatropha curcas]
15 Hb_006895_010 0.0835460449 - - PREDICTED: secologanin synthase-like [Citrus sinensis]
16 Hb_010577_020 0.0835759693 - - -
17 Hb_001981_050 0.0855491956 - - PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Jatropha curcas]
18 Hb_004943_020 0.0865598454 - - cationic amino acid transporter, putative [Ricinus communis]
19 Hb_004459_010 0.0883459712 - - PREDICTED: phospholipase A1-IIgamma-like [Jatropha curcas]
20 Hb_185811_010 0.0917422682 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_024723_010 Hb_024723_010 Hb_000111_490 Hb_000111_490 Hb_024723_010--Hb_000111_490 Hb_000485_100 Hb_000485_100 Hb_024723_010--Hb_000485_100 Hb_002391_010 Hb_002391_010 Hb_024723_010--Hb_002391_010 Hb_056506_040 Hb_056506_040 Hb_024723_010--Hb_056506_040 Hb_001926_080 Hb_001926_080 Hb_024723_010--Hb_001926_080 Hb_000326_120 Hb_000326_120 Hb_024723_010--Hb_000326_120 Hb_000111_490--Hb_056506_040 Hb_000111_490--Hb_000485_100 Hb_000111_490--Hb_002391_010 Hb_068804_190 Hb_068804_190 Hb_000111_490--Hb_068804_190 Hb_000111_490--Hb_001926_080 Hb_000485_100--Hb_002391_010 Hb_000485_100--Hb_001926_080 Hb_000224_190 Hb_000224_190 Hb_000485_100--Hb_000224_190 Hb_006895_010 Hb_006895_010 Hb_000485_100--Hb_006895_010 Hb_002391_010--Hb_001926_080 Hb_002391_010--Hb_000224_190 Hb_001345_050 Hb_001345_050 Hb_002391_010--Hb_001345_050 Hb_010577_020 Hb_010577_020 Hb_056506_040--Hb_010577_020 Hb_056506_040--Hb_068804_190 Hb_005532_080 Hb_005532_080 Hb_056506_040--Hb_005532_080 Hb_011549_040 Hb_011549_040 Hb_056506_040--Hb_011549_040 Hb_001926_080--Hb_000224_190 Hb_072771_010 Hb_072771_010 Hb_001926_080--Hb_072771_010 Hb_001926_080--Hb_001345_050 Hb_002326_010 Hb_002326_010 Hb_001926_080--Hb_002326_010 Hb_000326_120--Hb_000111_490 Hb_000326_120--Hb_000485_100 Hb_001278_120 Hb_001278_120 Hb_000326_120--Hb_001278_120 Hb_000343_070 Hb_000343_070 Hb_000326_120--Hb_000343_070 Hb_000326_120--Hb_002391_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.516865 1.25524 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.0321

CAGE analysis