Hb_000343_070

Information

Type -
Description -
Location Contig343: 46641-46991
Sequence    

Annotation

kegg
ID rcu:RCOM_1495350
description hypothetical protein
nr
ID KDP37209.1
description hypothetical protein JCGZ_06265 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZH4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06265 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000343_070 0.0 - - hypothetical protein JCGZ_06265 [Jatropha curcas]
2 Hb_001278_120 0.0423520551 - - PREDICTED: reticulon-like protein B14 [Jatropha curcas]
3 Hb_004943_020 0.0550498682 - - cationic amino acid transporter, putative [Ricinus communis]
4 Hb_005269_060 0.0622853529 - - PREDICTED: rac-like GTP-binding protein RAC2 [Cicer arietinum]
5 Hb_049955_010 0.0629125805 - - hypothetical protein EUGRSUZ_B00742 [Eucalyptus grandis]
6 Hb_010172_040 0.0633682465 - - PREDICTED: BAG family molecular chaperone regulator 3-like isoform X1 [Jatropha curcas]
7 Hb_000707_090 0.0657560927 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Jatropha curcas]
8 Hb_061256_020 0.0692316665 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
9 Hb_000326_120 0.0735244858 transcription factor TF Family: MYB-related transcription factor, putative [Ricinus communis]
10 Hb_007382_110 0.0736683472 - - PREDICTED: bidirectional sugar transporter N3 [Jatropha curcas]
11 Hb_000421_040 0.0747007376 - - Peptide transporter, putative [Ricinus communis]
12 Hb_024723_010 0.0751477547 - - PREDICTED: leucine-rich repeat receptor protein kinase EMS1-like [Jatropha curcas]
13 Hb_000485_100 0.0761069967 - - PREDICTED: putative UPF0481 protein At3g02645 [Populus euphratica]
14 Hb_004459_010 0.0765525181 - - PREDICTED: phospholipase A1-IIgamma-like [Jatropha curcas]
15 Hb_002809_180 0.0816560545 - - PREDICTED: homeobox protein HD1 [Jatropha curcas]
16 Hb_000111_490 0.0824694775 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000557_080 0.0835231694 - - conserved hypothetical protein [Ricinus communis]
18 Hb_011344_040 0.0867055341 - - PREDICTED: 21 kDa protein [Jatropha curcas]
19 Hb_006895_010 0.0893570936 - - PREDICTED: secologanin synthase-like [Citrus sinensis]
20 Hb_001289_040 0.0898139074 - - NDR1/HIN1-like 1 [Theobroma cacao]

Gene co-expression network

sample Hb_000343_070 Hb_000343_070 Hb_001278_120 Hb_001278_120 Hb_000343_070--Hb_001278_120 Hb_004943_020 Hb_004943_020 Hb_000343_070--Hb_004943_020 Hb_005269_060 Hb_005269_060 Hb_000343_070--Hb_005269_060 Hb_049955_010 Hb_049955_010 Hb_000343_070--Hb_049955_010 Hb_010172_040 Hb_010172_040 Hb_000343_070--Hb_010172_040 Hb_000707_090 Hb_000707_090 Hb_000343_070--Hb_000707_090 Hb_001278_120--Hb_004943_020 Hb_004459_010 Hb_004459_010 Hb_001278_120--Hb_004459_010 Hb_128986_010 Hb_128986_010 Hb_001278_120--Hb_128986_010 Hb_003855_060 Hb_003855_060 Hb_001278_120--Hb_003855_060 Hb_000326_120 Hb_000326_120 Hb_001278_120--Hb_000326_120 Hb_004943_020--Hb_003855_060 Hb_143629_170 Hb_143629_170 Hb_004943_020--Hb_143629_170 Hb_007904_150 Hb_007904_150 Hb_004943_020--Hb_007904_150 Hb_004943_020--Hb_004459_010 Hb_005269_060--Hb_049955_010 Hb_005269_060--Hb_001278_120 Hb_011344_040 Hb_011344_040 Hb_005269_060--Hb_011344_040 Hb_005269_060--Hb_004943_020 Hb_005269_060--Hb_010172_040 Hb_185608_010 Hb_185608_010 Hb_049955_010--Hb_185608_010 Hb_162450_010 Hb_162450_010 Hb_049955_010--Hb_162450_010 Hb_057862_010 Hb_057862_010 Hb_049955_010--Hb_057862_010 Hb_005532_080 Hb_005532_080 Hb_049955_010--Hb_005532_080 Hb_002809_180 Hb_002809_180 Hb_010172_040--Hb_002809_180 Hb_000421_040 Hb_000421_040 Hb_010172_040--Hb_000421_040 Hb_000172_270 Hb_000172_270 Hb_010172_040--Hb_000172_270 Hb_010172_040--Hb_000707_090 Hb_010172_040--Hb_001278_120 Hb_000557_080 Hb_000557_080 Hb_000707_090--Hb_000557_080 Hb_000707_090--Hb_000421_040 Hb_007382_110 Hb_007382_110 Hb_000707_090--Hb_007382_110 Hb_001289_040 Hb_001289_040 Hb_000707_090--Hb_001289_040 Hb_006895_010 Hb_006895_010 Hb_000707_090--Hb_006895_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.31419 24.9631 82.3441 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.904634 61.7709

CAGE analysis