Hb_004459_010

Information

Type -
Description -
Location Contig4459: 7537-8909
Sequence    

Annotation

kegg
ID rcu:RCOM_1014390
description triacylglycerol lipase, putative
nr
ID XP_012091744.1
description PREDICTED: phospholipase A1-IIgamma-like [Jatropha curcas]
swissprot
ID O49523
description Phospholipase A1-IIgamma OS=Arabidopsis thaliana GN=DSEL PE=1 SV=1
trembl
ID A0A067JE83
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21544 PE=4 SV=1
Gene Ontology
ID GO:0008970
description phospholipase a1-iigamma-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42997: 7868-8283 , PASA_asmbl_42998: 8655-8808
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004459_010 0.0 - - PREDICTED: phospholipase A1-IIgamma-like [Jatropha curcas]
2 Hb_001278_120 0.0460374731 - - PREDICTED: reticulon-like protein B14 [Jatropha curcas]
3 Hb_000917_300 0.0537112248 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Populus euphratica]
4 Hb_001981_050 0.0627370265 - - PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Jatropha curcas]
5 Hb_003855_060 0.0664687202 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
6 Hb_095744_010 0.0719262588 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 [Fragaria vesca subsp. vesca]
7 Hb_000318_310 0.0721486416 - - hypothetical protein POPTR_0009s11190g [Populus trichocarpa]
8 Hb_004943_020 0.074019061 - - cationic amino acid transporter, putative [Ricinus communis]
9 Hb_128986_010 0.0750916118 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000017_180 0.0755730725 - - hypothetical protein JCGZ_20551 [Jatropha curcas]
11 Hb_185811_010 0.0763166138 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
12 Hb_000343_070 0.0765525181 - - hypothetical protein JCGZ_06265 [Jatropha curcas]
13 Hb_000232_040 0.0770709976 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 86 isoform X2 [Populus euphratica]
14 Hb_001048_010 0.0787314598 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 7 [Jatropha curcas]
15 Hb_002809_180 0.0787635473 - - PREDICTED: homeobox protein HD1 [Jatropha curcas]
16 Hb_061256_020 0.0810916115 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
17 Hb_002062_010 0.0812294243 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
18 Hb_010589_010 0.0817811349 - - PREDICTED: classical arabinogalactan protein 9-like [Jatropha curcas]
19 Hb_000485_100 0.0829662142 - - PREDICTED: putative UPF0481 protein At3g02645 [Populus euphratica]
20 Hb_010172_040 0.0835933077 - - PREDICTED: BAG family molecular chaperone regulator 3-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004459_010 Hb_004459_010 Hb_001278_120 Hb_001278_120 Hb_004459_010--Hb_001278_120 Hb_000917_300 Hb_000917_300 Hb_004459_010--Hb_000917_300 Hb_001981_050 Hb_001981_050 Hb_004459_010--Hb_001981_050 Hb_003855_060 Hb_003855_060 Hb_004459_010--Hb_003855_060 Hb_095744_010 Hb_095744_010 Hb_004459_010--Hb_095744_010 Hb_000318_310 Hb_000318_310 Hb_004459_010--Hb_000318_310 Hb_000343_070 Hb_000343_070 Hb_001278_120--Hb_000343_070 Hb_004943_020 Hb_004943_020 Hb_001278_120--Hb_004943_020 Hb_128986_010 Hb_128986_010 Hb_001278_120--Hb_128986_010 Hb_001278_120--Hb_003855_060 Hb_000326_120 Hb_000326_120 Hb_001278_120--Hb_000326_120 Hb_000917_300--Hb_001981_050 Hb_000232_040 Hb_000232_040 Hb_000917_300--Hb_000232_040 Hb_000917_300--Hb_000318_310 Hb_185811_010 Hb_185811_010 Hb_000917_300--Hb_185811_010 Hb_132880_010 Hb_132880_010 Hb_000917_300--Hb_132880_010 Hb_001981_050--Hb_185811_010 Hb_001981_050--Hb_000318_310 Hb_001981_050--Hb_003855_060 Hb_007904_150 Hb_007904_150 Hb_001981_050--Hb_007904_150 Hb_002740_050 Hb_002740_050 Hb_003855_060--Hb_002740_050 Hb_003855_060--Hb_007904_150 Hb_003855_060--Hb_004943_020 Hb_003855_060--Hb_000318_310 Hb_003855_060--Hb_185811_010 Hb_095744_010--Hb_132880_010 Hb_003549_100 Hb_003549_100 Hb_095744_010--Hb_003549_100 Hb_144550_010 Hb_144550_010 Hb_095744_010--Hb_144550_010 Hb_095744_010--Hb_000917_300 Hb_010589_010 Hb_010589_010 Hb_095744_010--Hb_010589_010 Hb_000318_310--Hb_185811_010 Hb_000318_310--Hb_007904_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.128642 2.27513 5.65579 0 0.017451
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0362608 5.38824

CAGE analysis