Hb_185811_010

Information

Type -
Description -
Location Contig185811: 5178-6169
Sequence    

Annotation

kegg
ID rcu:RCOM_1619620
description Flavonol 4'-sulfotransferase, putative (EC:2.8.2.4)
nr
ID XP_002512030.1
description Flavonol 4'-sulfotransferase, putative [Ricinus communis]
swissprot
ID Q9M1V2
description Cytosolic sulfotransferase 5 OS=Arabidopsis thaliana GN=SOT5 PE=1 SV=1
trembl
ID B9RE91
description Sulfotransferase OS=Ricinus communis GN=RCOM_1619620 PE=3 SV=1
Gene Ontology
ID GO:0016740
description flavonol 4 -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18200: 5498-6015
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_185811_010 0.0 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
2 Hb_001981_050 0.0227562432 - - PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Jatropha curcas]
3 Hb_000318_310 0.0475701783 - - hypothetical protein POPTR_0009s11190g [Populus trichocarpa]
4 Hb_001345_050 0.0616337071 - - hypothetical protein POPTR_0014s14480g [Populus trichocarpa]
5 Hb_072771_010 0.0622710618 - - Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis]
6 Hb_004807_010 0.0624751568 - - PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]
7 Hb_003855_060 0.0633634569 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
8 Hb_001926_080 0.0680893282 - - PREDICTED: uncharacterized protein LOC103454919 [Malus domestica]
9 Hb_012098_120 0.0683811786 - - PREDICTED: putative elongation of fatty acids protein DDB_G0272012 [Jatropha curcas]
10 Hb_000917_300 0.0700094509 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Populus euphratica]
11 Hb_002391_010 0.072850429 - - PREDICTED: probable acyl-activating enzyme 1, peroxisomal [Jatropha curcas]
12 Hb_007904_150 0.0732801535 - - PREDICTED: probable pectate lyase 5 [Populus euphratica]
13 Hb_000224_190 0.0755234993 - - zinc finger protein, putative [Ricinus communis]
14 Hb_004459_010 0.0763166138 - - PREDICTED: phospholipase A1-IIgamma-like [Jatropha curcas]
15 Hb_000915_170 0.0794076529 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 isoform X1 [Vitis vinifera]
16 Hb_000803_080 0.0794677744 desease resistance Gene Name: ABC_tran ATP-binding cassette transporter, putative [Ricinus communis]
17 Hb_005839_040 0.0798725451 - - hypothetical protein POPTR_0019s08420g [Populus trichocarpa]
18 Hb_006588_140 0.0823338967 - - PREDICTED: uncharacterized protein LOC104906772 [Beta vulgaris subsp. vulgaris]
19 Hb_154038_010 0.0826793222 - - cytochrome P450, putative [Ricinus communis]
20 Hb_132880_010 0.08406949 - - PREDICTED: uncharacterized protein LOC105641595 [Jatropha curcas]

Gene co-expression network

sample Hb_185811_010 Hb_185811_010 Hb_001981_050 Hb_001981_050 Hb_185811_010--Hb_001981_050 Hb_000318_310 Hb_000318_310 Hb_185811_010--Hb_000318_310 Hb_001345_050 Hb_001345_050 Hb_185811_010--Hb_001345_050 Hb_072771_010 Hb_072771_010 Hb_185811_010--Hb_072771_010 Hb_004807_010 Hb_004807_010 Hb_185811_010--Hb_004807_010 Hb_003855_060 Hb_003855_060 Hb_185811_010--Hb_003855_060 Hb_001981_050--Hb_000318_310 Hb_001981_050--Hb_003855_060 Hb_007904_150 Hb_007904_150 Hb_001981_050--Hb_007904_150 Hb_004459_010 Hb_004459_010 Hb_001981_050--Hb_004459_010 Hb_000917_300 Hb_000917_300 Hb_001981_050--Hb_000917_300 Hb_000318_310--Hb_003855_060 Hb_000318_310--Hb_007904_150 Hb_000318_310--Hb_000917_300 Hb_000318_310--Hb_004459_010 Hb_001345_050--Hb_072771_010 Hb_154038_010 Hb_154038_010 Hb_001345_050--Hb_154038_010 Hb_000224_190 Hb_000224_190 Hb_001345_050--Hb_000224_190 Hb_008453_050 Hb_008453_050 Hb_001345_050--Hb_008453_050 Hb_002326_010 Hb_002326_010 Hb_001345_050--Hb_002326_010 Hb_001926_080 Hb_001926_080 Hb_001345_050--Hb_001926_080 Hb_072771_010--Hb_154038_010 Hb_072771_010--Hb_000224_190 Hb_072771_010--Hb_008453_050 Hb_072771_010--Hb_002326_010 Hb_072771_010--Hb_001926_080 Hb_012098_120 Hb_012098_120 Hb_004807_010--Hb_012098_120 Hb_000329_120 Hb_000329_120 Hb_004807_010--Hb_000329_120 Hb_005839_040 Hb_005839_040 Hb_004807_010--Hb_005839_040 Hb_000803_080 Hb_000803_080 Hb_004807_010--Hb_000803_080 Hb_009233_020 Hb_009233_020 Hb_004807_010--Hb_009233_020 Hb_002740_050 Hb_002740_050 Hb_003855_060--Hb_002740_050 Hb_003855_060--Hb_007904_150 Hb_004943_020 Hb_004943_020 Hb_003855_060--Hb_004943_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.096636 6.2992 10.4845 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0573209 12.3589

CAGE analysis