Hb_144550_010

Information

Type -
Description -
Location Contig144550: 805-2172
Sequence    

Annotation

kegg
ID rcu:RCOM_0410720
description UDP-glucosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_012081690.1
description PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
swissprot
ID Q66PF2
description Putative UDP-rhamnose:rhamnosyltransferase 1 OS=Fragaria ananassa GN=GT4 PE=2 SV=1
trembl
ID A0A067K0Q8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18726 PE=4 SV=1
Gene Ontology
ID GO:0016758
description udp-rhamnose:rhamnosyltransferase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11666: 1873-2108
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_144550_010 0.0 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
2 Hb_132880_010 0.0630518323 - - PREDICTED: uncharacterized protein LOC105641595 [Jatropha curcas]
3 Hb_001472_150 0.0674482177 - - PREDICTED: cytochrome P450 86A7 [Jatropha curcas]
4 Hb_029587_010 0.0682821937 - - G-type lectin S-receptor-like serine/threonine-protein kinase [Glycine soja]
5 Hb_001593_040 0.0723717513 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
6 Hb_095744_010 0.0725322679 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 [Fragaria vesca subsp. vesca]
7 Hb_064445_020 0.0739396285 - - PREDICTED: serine carboxypeptidase-like 34 [Populus euphratica]
8 Hb_002477_190 0.0781804032 - - hypothetical protein EUGRSUZ_C03380, partial [Eucalyptus grandis]
9 Hb_000077_040 0.080697237 - - PREDICTED: O-acyltransferase WSD1-like [Jatropha curcas]
10 Hb_008453_050 0.0807421795 - - PREDICTED: peroxidase 64 [Jatropha curcas]
11 Hb_011362_010 0.0808670497 - - hypothetical protein JCGZ_14809 [Jatropha curcas]
12 Hb_002326_010 0.0809914965 transcription factor TF Family: G2-like hypothetical protein RCOM_1592640 [Ricinus communis]
13 Hb_003549_100 0.0821538793 - - PREDICTED: uncharacterized protein LOC105647410 [Jatropha curcas]
14 Hb_104014_020 0.0823302642 - - PREDICTED: probable receptor-like protein kinase At5g39020 isoform X2 [Jatropha curcas]
15 Hb_000115_030 0.0826460097 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 42 [Jatropha curcas]
16 Hb_005062_100 0.0835362584 - - Ferredoxin-2, chloroplast precursor, putative [Ricinus communis]
17 Hb_000917_300 0.0839820799 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Populus euphratica]
18 Hb_154038_010 0.0844948425 - - cytochrome P450, putative [Ricinus communis]
19 Hb_006483_040 0.0846036285 - - PREDICTED: uncharacterized protein LOC105639715 [Jatropha curcas]
20 Hb_003025_170 0.08478597 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Jatropha curcas]

Gene co-expression network

sample Hb_144550_010 Hb_144550_010 Hb_132880_010 Hb_132880_010 Hb_144550_010--Hb_132880_010 Hb_001472_150 Hb_001472_150 Hb_144550_010--Hb_001472_150 Hb_029587_010 Hb_029587_010 Hb_144550_010--Hb_029587_010 Hb_001593_040 Hb_001593_040 Hb_144550_010--Hb_001593_040 Hb_095744_010 Hb_095744_010 Hb_144550_010--Hb_095744_010 Hb_064445_020 Hb_064445_020 Hb_144550_010--Hb_064445_020 Hb_002073_130 Hb_002073_130 Hb_132880_010--Hb_002073_130 Hb_003549_100 Hb_003549_100 Hb_132880_010--Hb_003549_100 Hb_132880_010--Hb_095744_010 Hb_002326_010 Hb_002326_010 Hb_132880_010--Hb_002326_010 Hb_132880_010--Hb_001593_040 Hb_006483_040 Hb_006483_040 Hb_001472_150--Hb_006483_040 Hb_001232_070 Hb_001232_070 Hb_001472_150--Hb_001232_070 Hb_002391_340 Hb_002391_340 Hb_001472_150--Hb_002391_340 Hb_154038_010 Hb_154038_010 Hb_001472_150--Hb_154038_010 Hb_001472_150--Hb_064445_020 Hb_008453_050 Hb_008453_050 Hb_001472_150--Hb_008453_050 Hb_010589_010 Hb_010589_010 Hb_029587_010--Hb_010589_010 Hb_029587_010--Hb_003549_100 Hb_002477_190 Hb_002477_190 Hb_029587_010--Hb_002477_190 Hb_001711_140 Hb_001711_140 Hb_029587_010--Hb_001711_140 Hb_001397_020 Hb_001397_020 Hb_029587_010--Hb_001397_020 Hb_001593_040--Hb_064445_020 Hb_001593_040--Hb_002326_010 Hb_001593_040--Hb_008453_050 Hb_000077_040 Hb_000077_040 Hb_001593_040--Hb_000077_040 Hb_001593_040--Hb_154038_010 Hb_104014_020 Hb_104014_020 Hb_001593_040--Hb_104014_020 Hb_095744_010--Hb_003549_100 Hb_004459_010 Hb_004459_010 Hb_095744_010--Hb_004459_010 Hb_000917_300 Hb_000917_300 Hb_095744_010--Hb_000917_300 Hb_095744_010--Hb_010589_010 Hb_064445_020--Hb_002326_010 Hb_064445_020--Hb_154038_010 Hb_064445_020--Hb_008453_050 Hb_064445_020--Hb_006483_040 Hb_000224_190 Hb_000224_190 Hb_064445_020--Hb_000224_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.34899 20.0203 47.945 0 0.0612529
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0490866 0.0386074 0 0 75.9594

CAGE analysis