Hb_095744_010

Information

Type -
Description -
Location Contig95744: 2-471
Sequence    

Annotation

kegg
ID pvu:PHAVU_002G2200001
description hypothetical protein
nr
ID XP_011460353.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 [Fragaria vesca subsp. vesca]
swissprot
ID Q39086
description Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1
trembl
ID V7CM07
description Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_002G2200001g PE=4 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase at1g11410

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_095744_010 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 [Fragaria vesca subsp. vesca]
2 Hb_132880_010 0.0619418545 - - PREDICTED: uncharacterized protein LOC105641595 [Jatropha curcas]
3 Hb_003549_100 0.0688061866 - - PREDICTED: uncharacterized protein LOC105647410 [Jatropha curcas]
4 Hb_004459_010 0.0719262588 - - PREDICTED: phospholipase A1-IIgamma-like [Jatropha curcas]
5 Hb_144550_010 0.0725322679 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
6 Hb_000917_300 0.0751137429 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Populus euphratica]
7 Hb_010589_010 0.0788062903 - - PREDICTED: classical arabinogalactan protein 9-like [Jatropha curcas]
8 Hb_029587_010 0.0789270924 - - G-type lectin S-receptor-like serine/threonine-protein kinase [Glycine soja]
9 Hb_000076_240 0.0840730351 - - Early nodulin 55-2 precursor, putative [Ricinus communis]
10 Hb_001397_020 0.085483773 - - cytochrome P450 family protein [Populus trichocarpa]
11 Hb_000343_080 0.092215947 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002073_130 0.0924259619 - - PREDICTED: uncharacterized protein LOC100246830 [Vitis vinifera]
13 Hb_000002_110 0.0941556095 - - hypothetical protein EUGRSUZ_B02140 [Eucalyptus grandis]
14 Hb_001048_010 0.0943989089 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 7 [Jatropha curcas]
15 Hb_002477_190 0.0947875937 - - hypothetical protein EUGRSUZ_C03380, partial [Eucalyptus grandis]
16 Hb_000017_180 0.0957502751 - - hypothetical protein JCGZ_20551 [Jatropha curcas]
17 Hb_000427_020 0.0967989852 - - PsbA, partial [Dianthus pygmaeus]
18 Hb_001433_090 0.0982905945 - - Pectinesterase PPE8B precursor, putative [Ricinus communis]
19 Hb_000232_040 0.0987458289 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 86 isoform X2 [Populus euphratica]
20 Hb_002326_010 0.098808838 transcription factor TF Family: G2-like hypothetical protein RCOM_1592640 [Ricinus communis]

Gene co-expression network

sample Hb_095744_010 Hb_095744_010 Hb_132880_010 Hb_132880_010 Hb_095744_010--Hb_132880_010 Hb_003549_100 Hb_003549_100 Hb_095744_010--Hb_003549_100 Hb_004459_010 Hb_004459_010 Hb_095744_010--Hb_004459_010 Hb_144550_010 Hb_144550_010 Hb_095744_010--Hb_144550_010 Hb_000917_300 Hb_000917_300 Hb_095744_010--Hb_000917_300 Hb_010589_010 Hb_010589_010 Hb_095744_010--Hb_010589_010 Hb_002073_130 Hb_002073_130 Hb_132880_010--Hb_002073_130 Hb_132880_010--Hb_003549_100 Hb_132880_010--Hb_144550_010 Hb_002326_010 Hb_002326_010 Hb_132880_010--Hb_002326_010 Hb_001593_040 Hb_001593_040 Hb_132880_010--Hb_001593_040 Hb_001397_020 Hb_001397_020 Hb_003549_100--Hb_001397_020 Hb_029587_010 Hb_029587_010 Hb_003549_100--Hb_029587_010 Hb_003549_100--Hb_010589_010 Hb_002809_180 Hb_002809_180 Hb_003549_100--Hb_002809_180 Hb_001278_120 Hb_001278_120 Hb_004459_010--Hb_001278_120 Hb_004459_010--Hb_000917_300 Hb_001981_050 Hb_001981_050 Hb_004459_010--Hb_001981_050 Hb_003855_060 Hb_003855_060 Hb_004459_010--Hb_003855_060 Hb_000318_310 Hb_000318_310 Hb_004459_010--Hb_000318_310 Hb_001472_150 Hb_001472_150 Hb_144550_010--Hb_001472_150 Hb_144550_010--Hb_029587_010 Hb_144550_010--Hb_001593_040 Hb_064445_020 Hb_064445_020 Hb_144550_010--Hb_064445_020 Hb_000917_300--Hb_001981_050 Hb_000232_040 Hb_000232_040 Hb_000917_300--Hb_000232_040 Hb_000917_300--Hb_000318_310 Hb_185811_010 Hb_185811_010 Hb_000917_300--Hb_185811_010 Hb_000917_300--Hb_132880_010 Hb_010589_010--Hb_001397_020 Hb_010589_010--Hb_029587_010 Hb_001433_090 Hb_001433_090 Hb_010589_010--Hb_001433_090 Hb_000002_110 Hb_000002_110 Hb_010589_010--Hb_000002_110 Hb_001500_130 Hb_001500_130 Hb_010589_010--Hb_001500_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.60374 8.15607 21.5503 0 0.314939
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.151788 27.4219

CAGE analysis