Hb_000077_040

Information

Type -
Description -
Location Contig77: 37526-45632
Sequence    

Annotation

kegg
ID pop:POPTR_0017s04300g
description POPTRDRAFT_577262; hypothetical protein
nr
ID XP_012088260.1
description PREDICTED: O-acyltransferase WSD1-like [Jatropha curcas]
swissprot
ID Q93ZR6
description O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=WSD1 PE=2 SV=1
trembl
ID A0A067JJN5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25769 PE=4 SV=1
Gene Ontology
ID GO:0004144
description o-acyltransferase wsd1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57561: 37552-38246 , PASA_asmbl_57562: 44935-45467
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000077_040 0.0 - - PREDICTED: O-acyltransferase WSD1-like [Jatropha curcas]
2 Hb_104014_020 0.0328331768 - - PREDICTED: probable receptor-like protein kinase At5g39020 isoform X2 [Jatropha curcas]
3 Hb_001593_040 0.0403070507 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
4 Hb_000115_030 0.040925697 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 42 [Jatropha curcas]
5 Hb_003025_170 0.0420082037 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Jatropha curcas]
6 Hb_002973_060 0.0446581332 - - conserved hypothetical protein [Ricinus communis]
7 Hb_064445_020 0.0500465336 - - PREDICTED: serine carboxypeptidase-like 34 [Populus euphratica]
8 Hb_002326_010 0.0636099345 transcription factor TF Family: G2-like hypothetical protein RCOM_1592640 [Ricinus communis]
9 Hb_003786_030 0.0651740393 - - BnaUnng00830D [Brassica napus]
10 Hb_000724_040 0.066602243 transcription factor TF Family: MIKC PREDICTED: MADS-box protein CMB1-like [Jatropha curcas]
11 Hb_096907_010 0.0682490664 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
12 Hb_008453_050 0.070109016 - - PREDICTED: peroxidase 64 [Jatropha curcas]
13 Hb_001437_170 0.0722803377 - - hypothetical protein POPTR_0009s01390g [Populus trichocarpa]
14 Hb_005228_050 0.0728666688 - - PREDICTED: uncharacterized protein LOC104896168 [Beta vulgaris subsp. vulgaris]
15 Hb_006483_040 0.0736117855 - - PREDICTED: uncharacterized protein LOC105639715 [Jatropha curcas]
16 Hb_154038_010 0.0744560909 - - cytochrome P450, putative [Ricinus communis]
17 Hb_000160_120 0.0778668293 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001472_150 0.0782095272 - - PREDICTED: cytochrome P450 86A7 [Jatropha curcas]
19 Hb_000023_100 0.0803423277 - - Mechanosensitive channel of small conductance-like 10 [Theobroma cacao]
20 Hb_144550_010 0.080697237 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000077_040 Hb_000077_040 Hb_104014_020 Hb_104014_020 Hb_000077_040--Hb_104014_020 Hb_001593_040 Hb_001593_040 Hb_000077_040--Hb_001593_040 Hb_000115_030 Hb_000115_030 Hb_000077_040--Hb_000115_030 Hb_003025_170 Hb_003025_170 Hb_000077_040--Hb_003025_170 Hb_002973_060 Hb_002973_060 Hb_000077_040--Hb_002973_060 Hb_064445_020 Hb_064445_020 Hb_000077_040--Hb_064445_020 Hb_104014_020--Hb_003025_170 Hb_104014_020--Hb_002973_060 Hb_104014_020--Hb_001593_040 Hb_104014_020--Hb_000115_030 Hb_003786_030 Hb_003786_030 Hb_104014_020--Hb_003786_030 Hb_001593_040--Hb_064445_020 Hb_002326_010 Hb_002326_010 Hb_001593_040--Hb_002326_010 Hb_008453_050 Hb_008453_050 Hb_001593_040--Hb_008453_050 Hb_154038_010 Hb_154038_010 Hb_001593_040--Hb_154038_010 Hb_000115_030--Hb_002973_060 Hb_096907_010 Hb_096907_010 Hb_000115_030--Hb_096907_010 Hb_001437_170 Hb_001437_170 Hb_000115_030--Hb_001437_170 Hb_000160_120 Hb_000160_120 Hb_000115_030--Hb_000160_120 Hb_003025_170--Hb_001593_040 Hb_003025_170--Hb_002973_060 Hb_003025_170--Hb_064445_020 Hb_003025_170--Hb_002326_010 Hb_000724_040 Hb_000724_040 Hb_002973_060--Hb_000724_040 Hb_002973_060--Hb_003786_030 Hb_005228_050 Hb_005228_050 Hb_002973_060--Hb_005228_050 Hb_064445_020--Hb_002326_010 Hb_064445_020--Hb_154038_010 Hb_064445_020--Hb_008453_050 Hb_006483_040 Hb_006483_040 Hb_064445_020--Hb_006483_040 Hb_000224_190 Hb_000224_190 Hb_064445_020--Hb_000224_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0254598 0 2.09535 5.93155 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 9.51778

CAGE analysis